Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
SHOX2O60902 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SHOX2O60902 AC087468.1-201ENST00000604365 630 ntBASIC4.39□□□□□ -1.71
SHOX2O60902 AP003392.5-201ENST00000607857 415 ntBASIC4.39□□□□□ -1.71
SHOX2O60902 AP001521.2-201ENST00000608772 546 ntBASIC4.39□□□□□ -1.71
SHOX2O60902 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.39□□□□□ -1.71
SHOX2O60902 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.39□□□□□ -1.71
SHOX2O60902 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
SHOX2O60902 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.38□□□□□ -1.71
SHOX2O60902 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.38□□□□□ -1.71
SHOX2O60902 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SHOX2O60902 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
SHOX2O60902 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SHOX2O60902 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SHOX2O60902 SNORA37-201ENST00000384504 129 ntBASIC4.38□□□□□ -1.71
SHOX2O60902 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.38□□□□□ -1.71
SHOX2O60902 HSPD1P16-201ENST00000402302 394 ntBASIC4.38□□□□□ -1.71
SHOX2O60902 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.38□□□□□ -1.71
SHOX2O60902 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.38□□□□□ -1.71
SHOX2O60902 ARAFP1-201ENST00000422172 605 ntBASIC4.38□□□□□ -1.71
SHOX2O60902 OR6K4P-201ENST00000423179 955 ntBASIC4.38□□□□□ -1.71
SHOX2O60902 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.38□□□□□ -1.71
SHOX2O60902 IFNNP1-201ENST00000429219 553 ntBASIC4.38□□□□□ -1.71
SHOX2O60902 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.38□□□□□ -1.71
SHOX2O60902 CNOT7P2-201ENST00000441051 832 ntBASIC4.38□□□□□ -1.71
SHOX2O60902 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.38□□□□□ -1.71
SHOX2O60902 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.38□□□□□ -1.71
SHOX2O60902 RN7SL30P-201ENST00000488416 306 ntBASIC4.38□□□□□ -1.71
SHOX2O60902 AC007686.1-201ENST00000488511 463 ntBASIC4.38□□□□□ -1.71
SHOX2O60902 AC106872.2-201ENST00000494303 480 ntBASIC4.38□□□□□ -1.71
SHOX2O60902 RPL31P61-201ENST00000496160 376 ntBASIC4.38□□□□□ -1.71
SHOX2O60902 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.38□□□□□ -1.71
SHOX2O60902 SCARNA22-201ENST00000503991 125 ntBASIC4.38□□□□□ -1.71
SHOX2O60902 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.38□□□□□ -1.71
SHOX2O60902 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.38□□□□□ -1.71
SHOX2O60902 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.38□□□□□ -1.71
SHOX2O60902 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.38□□□□□ -1.71
SHOX2O60902 NARSP2-201ENST00000518524 679 ntBASIC4.38□□□□□ -1.71
SHOX2O60902 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.38□□□□□ -1.71
SHOX2O60902 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.38□□□□□ -1.71
SHOX2O60902 AC096553.1-201ENST00000605169 829 ntBASIC4.38□□□□□ -1.71
SHOX2O60902 AL645927.2-201ENST00000618350 349 ntBASIC4.38□□□□□ -1.71
SHOX2O60902 LINC01739-205ENST00000641890 573 ntBASIC4.38□□□□□ -1.71
SHOX2O60902 ZNF733P-202ENST00000444809 1573 ntBASIC4.38□□□□□ -1.71
SHOX2O60902 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SHOX2O60902 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SHOX2O60902 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.38□□□□□ -1.71
SHOX2O60902 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.38□□□□□ -1.71
SHOX2O60902 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.38□□□□□ -1.71
SHOX2O60902 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SHOX2O60902 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.37□□□□□ -1.71
SHOX2O60902 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.37□□□□□ -1.71
SHOX2O60902 AL365396.1-201ENST00000430854 671 ntBASIC4.37□□□□□ -1.71
SHOX2O60902 UBE2V1P3-201ENST00000439651 417 ntBASIC4.37□□□□□ -1.71
SHOX2O60902 CEACAMP9-201ENST00000442990 513 ntBASIC4.37□□□□□ -1.71
SHOX2O60902 AC140172.1-201ENST00000502928 141 ntBASIC4.37□□□□□ -1.71
SHOX2O60902 AC018797.3-201ENST00000513388 1241 ntBASIC4.37□□□□□ -1.71
SHOX2O60902 RNA5SP92-201ENST00000516437 110 ntBASIC4.37□□□□□ -1.71
SHOX2O60902 RN7SKP147-201ENST00000517154 244 ntBASIC4.37□□□□□ -1.71
SHOX2O60902 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.37□□□□□ -1.71
SHOX2O60902 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.37□□□□□ -1.71
SHOX2O60902 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.37□□□□□ -1.71
SHOX2O60902 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SHOX2O60902 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.37□□□□□ -1.71
SHOX2O60902 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.37□□□□□ -1.71
SHOX2O60902 AL121839.1-201ENST00000556233 1185 ntBASIC4.37□□□□□ -1.71
SHOX2O60902 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.37□□□□□ -1.71
SHOX2O60902 CD24P2-201ENST00000565486 219 ntBASIC4.37□□□□□ -1.71
SHOX2O60902 AC006116.3-201ENST00000592968 361 ntBASIC4.37□□□□□ -1.71
SHOX2O60902 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC4.37□□□□□ -1.71
SHOX2O60902 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SHOX2O60902 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
SHOX2O60902 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.37□□□□□ -1.71
SHOX2O60902 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.37□□□□□ -1.71
SHOX2O60902 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.36□□□□□ -1.71
SHOX2O60902 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SHOX2O60902 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SHOX2O60902 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SHOX2O60902 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SHOX2O60902 RNU6-1263P-201ENST00000384601 106 ntBASIC4.36□□□□□ -1.71
SHOX2O60902 SNORA11.2-201ENST00000408318 127 ntBASIC4.36□□□□□ -1.71
SHOX2O60902 RN7SKP273-201ENST00000411392 314 ntBASIC4.36□□□□□ -1.71
SHOX2O60902 AC098592.2-201ENST00000413158 265 ntBASIC4.36□□□□□ -1.71
SHOX2O60902 OR2B7P-201ENST00000429302 934 ntBASIC4.36□□□□□ -1.71
SHOX2O60902 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.36□□□□□ -1.71
SHOX2O60902 AC012671.1-201ENST00000451912 203 ntBASIC4.36□□□□□ -1.71
SHOX2O60902 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.36□□□□□ -1.71
SHOX2O60902 RAD23BP3-201ENST00000454157 1152 ntBASIC4.36□□□□□ -1.71
SHOX2O60902 HSPE1P22-201ENST00000456856 327 ntBASIC4.36□□□□□ -1.71
SHOX2O60902 RN7SL93P-201ENST00000463035 293 ntBASIC4.36□□□□□ -1.71
SHOX2O60902 RN7SL385P-201ENST00000468873 276 ntBASIC4.36□□□□□ -1.71
SHOX2O60902 RPL37AP8-201ENST00000494116 276 ntBASIC4.36□□□□□ -1.71
SHOX2O60902 AC104164.2-201ENST00000496953 495 ntBASIC4.36□□□□□ -1.71
SHOX2O60902 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.36□□□□□ -1.71
SHOX2O60902 AC010342.1-201ENST00000514047 877 ntBASIC4.36□□□□□ -1.71
SHOX2O60902 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.36□□□□□ -1.71
SHOX2O60902 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.36□□□□□ -1.71
SHOX2O60902 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.36□□□□□ -1.71
SHOX2O60902 AC091515.1-201ENST00000548110 679 ntBASIC4.36□□□□□ -1.71
SHOX2O60902 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms