Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC120338.1-201ENST00000625074 1541 ntBASIC4.63□□□□□ -1.67
XRCC1P18887 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
XRCC1P18887 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.63□□□□□ -1.67
XRCC1P18887 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
XRCC1P18887 AL445487.1-201ENST00000415694 1580 ntBASIC4.63□□□□□ -1.67
XRCC1P18887 AC104118.1-201ENST00000607625 1589 ntBASIC4.63□□□□□ -1.67
XRCC1P18887 AC017104.4-201ENST00000636283 1592 ntBASIC4.63□□□□□ -1.67
XRCC1P18887 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
XRCC1P18887 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
XRCC1P18887 SNORA56-201ENST00000383966 129 ntBASIC4.63□□□□□ -1.67
XRCC1P18887 AC009237.10-201ENST00000414112 510 ntBASIC4.63□□□□□ -1.67
XRCC1P18887 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.63□□□□□ -1.67
XRCC1P18887 CYCSP10-201ENST00000417973 294 ntBASIC4.63□□□□□ -1.67
XRCC1P18887 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.63□□□□□ -1.67
XRCC1P18887 ARL5AP3-201ENST00000439327 386 ntBASIC4.63□□□□□ -1.67
XRCC1P18887 CCRL1P1-201ENST00000449542 1053 ntBASIC4.63□□□□□ -1.67
XRCC1P18887 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.63□□□□□ -1.67
XRCC1P18887 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.63□□□□□ -1.67
XRCC1P18887 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.63□□□□□ -1.67
XRCC1P18887 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.63□□□□□ -1.67
XRCC1P18887 AC134698.5-201ENST00000519444 336 ntBASIC4.63□□□□□ -1.67
XRCC1P18887 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.63□□□□□ -1.67
XRCC1P18887 OR5AN2P-201ENST00000534535 896 ntBASIC4.63□□□□□ -1.67
XRCC1P18887 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.63□□□□□ -1.67
XRCC1P18887 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.63□□□□□ -1.67
XRCC1P18887 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.63□□□□□ -1.67
XRCC1P18887 AC245128.3-201ENST00000594721 748 ntBASIC4.63□□□□□ -1.67
XRCC1P18887 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.63□□□□□ -1.67
XRCC1P18887 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.63□□□□□ -1.67
XRCC1P18887 AC079791.1-201ENST00000605356 973 ntBASIC4.63□□□□□ -1.67
XRCC1P18887 AL133370.2-201ENST00000619934 439 ntBASIC4.63□□□□□ -1.67
XRCC1P18887 AC010435.1-201ENST00000623353 1177 ntBASIC4.63□□□□□ -1.67
XRCC1P18887 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
XRCC1P18887 AC005332.5-201ENST00000591222 2919 ntBASIC4.63□□□□□ -1.67
XRCC1P18887 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
XRCC1P18887 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
XRCC1P18887 AC010928.1-201ENST00000592477 1447 ntBASIC4.63□□□□□ -1.67
XRCC1P18887 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
XRCC1P18887 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
XRCC1P18887 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.62□□□□□ -1.67
XRCC1P18887 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.62□□□□□ -1.67
XRCC1P18887 AL590240.1-201ENST00000334118 313 ntBASIC4.62□□□□□ -1.67
XRCC1P18887 RNU1-94P-201ENST00000362627 173 ntBASIC4.62□□□□□ -1.67
XRCC1P18887 RNU6-1251P-201ENST00000364502 107 ntBASIC4.62□□□□□ -1.67
XRCC1P18887 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
XRCC1P18887 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
XRCC1P18887 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
XRCC1P18887 RPS3AP23-201ENST00000401762 784 ntBASIC4.62□□□□□ -1.67
XRCC1P18887 AL080315.1-201ENST00000406055 466 ntBASIC4.62□□□□□ -1.67
XRCC1P18887 RN7SKP216-201ENST00000411050 312 ntBASIC4.62□□□□□ -1.67
XRCC1P18887 Y_RNA.625-201ENST00000411256 107 ntBASIC4.62□□□□□ -1.67
XRCC1P18887 AL591848.1-201ENST00000413092 322 ntBASIC4.62□□□□□ -1.67
XRCC1P18887 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.62□□□□□ -1.67
XRCC1P18887 VN1R37P-201ENST00000419096 748 ntBASIC4.62□□□□□ -1.67
XRCC1P18887 GLUD1P9-201ENST00000420997 1173 ntBASIC4.62□□□□□ -1.67
XRCC1P18887 MTND4LP13-201ENST00000425022 298 ntBASIC4.62□□□□□ -1.67
XRCC1P18887 MTCO1P45-201ENST00000431457 267 ntBASIC4.62□□□□□ -1.67
XRCC1P18887 PPIAP13-201ENST00000434706 478 ntBASIC4.62□□□□□ -1.67
XRCC1P18887 RSL24D1P2-201ENST00000445584 366 ntBASIC4.62□□□□□ -1.67
XRCC1P18887 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.62□□□□□ -1.67
XRCC1P18887 BUD31P2-201ENST00000449374 300 ntBASIC4.62□□□□□ -1.67
XRCC1P18887 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.62□□□□□ -1.67
XRCC1P18887 EIF2S2P5-201ENST00000457635 968 ntBASIC4.62□□□□□ -1.67
XRCC1P18887 RPL23AP72-201ENST00000492447 435 ntBASIC4.62□□□□□ -1.67
XRCC1P18887 RNU2-30P-201ENST00000516209 141 ntBASIC4.62□□□□□ -1.67
XRCC1P18887 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.62□□□□□ -1.67
XRCC1P18887 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.62□□□□□ -1.67
XRCC1P18887 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.62□□□□□ -1.67
XRCC1P18887 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.62□□□□□ -1.67
XRCC1P18887 AC093249.4-201ENST00000564755 259 ntBASIC4.62□□□□□ -1.67
XRCC1P18887 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.62□□□□□ -1.67
XRCC1P18887 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.62□□□□□ -1.67
XRCC1P18887 AC130352.1-201ENST00000602979 661 ntBASIC4.62□□□□□ -1.67
XRCC1P18887 AC233280.2-201ENST00000603917 1070 ntBASIC4.62□□□□□ -1.67
XRCC1P18887 AL008729.2-201ENST00000606393 473 ntBASIC4.62□□□□□ -1.67
XRCC1P18887 AC100814.1-201ENST00000606963 623 ntBASIC4.62□□□□□ -1.67
XRCC1P18887 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.62□□□□□ -1.67
XRCC1P18887 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.62□□□□□ -1.67
XRCC1P18887 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.62□□□□□ -1.67
XRCC1P18887 AC079298.2-201ENST00000623885 459 ntBASIC4.62□□□□□ -1.67
XRCC1P18887 AC021106.3-201ENST00000623925 531 ntBASIC4.62□□□□□ -1.67
XRCC1P18887 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
XRCC1P18887 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.62□□□□□ -1.67
XRCC1P18887 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.62□□□□□ -1.67
XRCC1P18887 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
XRCC1P18887 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
XRCC1P18887 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
XRCC1P18887 DHX40P1-201ENST00000588725 1412 ntBASIC4.62□□□□□ -1.67
XRCC1P18887 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
XRCC1P18887 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
XRCC1P18887 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
XRCC1P18887 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.61□□□□□ -1.67
XRCC1P18887 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
XRCC1P18887 OR4K15-201ENST00000305051 1216 ntBASIC4.61□□□□□ -1.67
XRCC1P18887 RNA5SP505-201ENST00000364748 108 ntBASIC4.61□□□□□ -1.67
XRCC1P18887 SNORA70F-201ENST00000384142 135 ntBASIC4.61□□□□□ -1.67
XRCC1P18887 RNU1-82P-201ENST00000390851 165 ntBASIC4.61□□□□□ -1.67
XRCC1P18887 SNORD65-201ENST00000391079 73 ntBASIC4.61□□□□□ -1.67
XRCC1P18887 AL049697.2-201ENST00000403708 294 ntBASIC4.61□□□□□ -1.67
XRCC1P18887 ARL4AP5-201ENST00000404372 599 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms