Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.74■□□□□ 0.27
Scn8aQ9WTU3 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.74■□□□□ 0.27
Scn8aQ9WTU3 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn8aQ9WTU3 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.74■□□□□ 0.27
Scn8aQ9WTU3 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scn8aQ9WTU3 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Scn8aQ9WTU3 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scn8aQ9WTU3 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn8aQ9WTU3 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scn8aQ9WTU3 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scn8aQ9WTU3 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn8aQ9WTU3 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn8aQ9WTU3 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scn8aQ9WTU3 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.73■□□□□ 0.27
Scn8aQ9WTU3 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Scn8aQ9WTU3 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn8aQ9WTU3 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn8aQ9WTU3 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn8aQ9WTU3 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn8aQ9WTU3 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scn8aQ9WTU3 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn8aQ9WTU3 Gm7153-201ENSMUST00000117092 455 ntBASIC16.73■□□□□ 0.27
Scn8aQ9WTU3 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
Scn8aQ9WTU3 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scn8aQ9WTU3 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn8aQ9WTU3 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn8aQ9WTU3 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.73■□□□□ 0.27
Scn8aQ9WTU3 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.73■□□□□ 0.27
Scn8aQ9WTU3 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn8aQ9WTU3 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Scn8aQ9WTU3 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn8aQ9WTU3 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn8aQ9WTU3 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Scn8aQ9WTU3 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn8aQ9WTU3 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn8aQ9WTU3 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn8aQ9WTU3 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Scn8aQ9WTU3 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn8aQ9WTU3 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn8aQ9WTU3 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn8aQ9WTU3 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn8aQ9WTU3 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.72■□□□□ 0.27
Scn8aQ9WTU3 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn8aQ9WTU3 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn8aQ9WTU3 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Scn8aQ9WTU3 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.72■□□□□ 0.27
Scn8aQ9WTU3 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn8aQ9WTU3 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn8aQ9WTU3 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn8aQ9WTU3 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.71■□□□□ 0.27
Scn8aQ9WTU3 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn8aQ9WTU3 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Scn8aQ9WTU3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn8aQ9WTU3 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn8aQ9WTU3 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.71■□□□□ 0.27
Scn8aQ9WTU3 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Scn8aQ9WTU3 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn8aQ9WTU3 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Scn8aQ9WTU3 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn8aQ9WTU3 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
Scn8aQ9WTU3 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn8aQ9WTU3 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Scn8aQ9WTU3 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.71■□□□□ 0.27
Scn8aQ9WTU3 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
Scn8aQ9WTU3 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn8aQ9WTU3 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.71■□□□□ 0.27
Scn8aQ9WTU3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Scn8aQ9WTU3 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
Scn8aQ9WTU3 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.71■□□□□ 0.26
Scn8aQ9WTU3 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Scn8aQ9WTU3 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scn8aQ9WTU3 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn8aQ9WTU3 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Scn8aQ9WTU3 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn8aQ9WTU3 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scn8aQ9WTU3 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.7■□□□□ 0.26
Scn8aQ9WTU3 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn8aQ9WTU3 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.7■□□□□ 0.26
Scn8aQ9WTU3 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn8aQ9WTU3 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn8aQ9WTU3 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn8aQ9WTU3 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn8aQ9WTU3 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn8aQ9WTU3 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scn8aQ9WTU3 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn8aQ9WTU3 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Scn8aQ9WTU3 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn8aQ9WTU3 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Scn8aQ9WTU3 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn8aQ9WTU3 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Scn8aQ9WTU3 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn8aQ9WTU3 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn8aQ9WTU3 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn8aQ9WTU3 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.69■□□□□ 0.26
Scn8aQ9WTU3 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn8aQ9WTU3 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scn8aQ9WTU3 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn8aQ9WTU3 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.69■□□□□ 0.26
Scn8aQ9WTU3 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Scn8aQ9WTU3 Gm15372-201ENSMUST00000120729 834 ntBASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms