Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.93■□□□□ 0.3
Tubd1Q9R1K7 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tubd1Q9R1K7 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tubd1Q9R1K7 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tubd1Q9R1K7 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tubd1Q9R1K7 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.93■□□□□ 0.3
Tubd1Q9R1K7 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tubd1Q9R1K7 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tubd1Q9R1K7 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tubd1Q9R1K7 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.93■□□□□ 0.3
Tubd1Q9R1K7 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tubd1Q9R1K7 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.93■□□□□ 0.3
Tubd1Q9R1K7 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tubd1Q9R1K7 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.93■□□□□ 0.3
Tubd1Q9R1K7 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tubd1Q9R1K7 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tubd1Q9R1K7 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tubd1Q9R1K7 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Tubd1Q9R1K7 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tubd1Q9R1K7 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tubd1Q9R1K7 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tubd1Q9R1K7 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.93■□□□□ 0.3
Tubd1Q9R1K7 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tubd1Q9R1K7 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Tubd1Q9R1K7 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
Tubd1Q9R1K7 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tubd1Q9R1K7 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tubd1Q9R1K7 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Tubd1Q9R1K7 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Tubd1Q9R1K7 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tubd1Q9R1K7 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Tubd1Q9R1K7 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tubd1Q9R1K7 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tubd1Q9R1K7 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Tubd1Q9R1K7 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tubd1Q9R1K7 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tubd1Q9R1K7 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tubd1Q9R1K7 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Tubd1Q9R1K7 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tubd1Q9R1K7 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Tubd1Q9R1K7 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.91■□□□□ 0.3
Tubd1Q9R1K7 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tubd1Q9R1K7 Mir770-201ENSMUST00000103252 94 ntBASIC16.91■□□□□ 0.3
Tubd1Q9R1K7 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tubd1Q9R1K7 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tubd1Q9R1K7 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tubd1Q9R1K7 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tubd1Q9R1K7 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tubd1Q9R1K7 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.91■□□□□ 0.3
Tubd1Q9R1K7 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tubd1Q9R1K7 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tubd1Q9R1K7 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tubd1Q9R1K7 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tubd1Q9R1K7 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tubd1Q9R1K7 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tubd1Q9R1K7 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Tubd1Q9R1K7 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Tubd1Q9R1K7 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.9■□□□□ 0.3
Tubd1Q9R1K7 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tubd1Q9R1K7 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tubd1Q9R1K7 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tubd1Q9R1K7 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Tubd1Q9R1K7 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Tubd1Q9R1K7 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tubd1Q9R1K7 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.9■□□□□ 0.3
Tubd1Q9R1K7 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tubd1Q9R1K7 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.9■□□□□ 0.3
Tubd1Q9R1K7 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tubd1Q9R1K7 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tubd1Q9R1K7 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tubd1Q9R1K7 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.9■□□□□ 0.3
Tubd1Q9R1K7 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Tubd1Q9R1K7 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tubd1Q9R1K7 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tubd1Q9R1K7 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Tubd1Q9R1K7 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tubd1Q9R1K7 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Tubd1Q9R1K7 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tubd1Q9R1K7 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tubd1Q9R1K7 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Tubd1Q9R1K7 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.9■□□□□ 0.3
Tubd1Q9R1K7 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tubd1Q9R1K7 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.89■□□□□ 0.3
Tubd1Q9R1K7 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Tubd1Q9R1K7 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Tubd1Q9R1K7 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Tubd1Q9R1K7 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Tubd1Q9R1K7 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tubd1Q9R1K7 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.89■□□□□ 0.29
Tubd1Q9R1K7 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Tubd1Q9R1K7 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tubd1Q9R1K7 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tubd1Q9R1K7 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.89■□□□□ 0.29
Tubd1Q9R1K7 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Tubd1Q9R1K7 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Tubd1Q9R1K7 Gm23634-201ENSMUST00000175071 91 ntBASIC16.89■□□□□ 0.29
Tubd1Q9R1K7 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.89■□□□□ 0.29
Tubd1Q9R1K7 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Tubd1Q9R1K7 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Tubd1Q9R1K7 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms