Protein–RNA interactions for Protein: Q9QXZ7

Nr2e3, Photoreceptor-specific nuclear receptor, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e3Q9QXZ7 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nr2e3Q9QXZ7 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nr2e3Q9QXZ7 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nr2e3Q9QXZ7 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.86■□□□□ 0.61
Nr2e3Q9QXZ7 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nr2e3Q9QXZ7 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nr2e3Q9QXZ7 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nr2e3Q9QXZ7 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nr2e3Q9QXZ7 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nr2e3Q9QXZ7 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nr2e3Q9QXZ7 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nr2e3Q9QXZ7 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nr2e3Q9QXZ7 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.85■□□□□ 0.61
Nr2e3Q9QXZ7 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nr2e3Q9QXZ7 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nr2e3Q9QXZ7 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Nr2e3Q9QXZ7 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Nr2e3Q9QXZ7 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nr2e3Q9QXZ7 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nr2e3Q9QXZ7 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nr2e3Q9QXZ7 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.85■□□□□ 0.61
Nr2e3Q9QXZ7 Gm7977-201ENSMUST00000193787 748 ntBASIC18.85■□□□□ 0.61
Nr2e3Q9QXZ7 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nr2e3Q9QXZ7 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nr2e3Q9QXZ7 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nr2e3Q9QXZ7 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Nr2e3Q9QXZ7 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.85■□□□□ 0.61
Nr2e3Q9QXZ7 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nr2e3Q9QXZ7 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nr2e3Q9QXZ7 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nr2e3Q9QXZ7 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nr2e3Q9QXZ7 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nr2e3Q9QXZ7 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nr2e3Q9QXZ7 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Nr2e3Q9QXZ7 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Nr2e3Q9QXZ7 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Nr2e3Q9QXZ7 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.84■□□□□ 0.61
Nr2e3Q9QXZ7 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nr2e3Q9QXZ7 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nr2e3Q9QXZ7 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nr2e3Q9QXZ7 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nr2e3Q9QXZ7 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Nr2e3Q9QXZ7 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nr2e3Q9QXZ7 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nr2e3Q9QXZ7 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.84■□□□□ 0.61
Nr2e3Q9QXZ7 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.84■□□□□ 0.61
Nr2e3Q9QXZ7 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nr2e3Q9QXZ7 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nr2e3Q9QXZ7 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nr2e3Q9QXZ7 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.84■□□□□ 0.61
Nr2e3Q9QXZ7 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nr2e3Q9QXZ7 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nr2e3Q9QXZ7 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nr2e3Q9QXZ7 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nr2e3Q9QXZ7 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nr2e3Q9QXZ7 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nr2e3Q9QXZ7 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nr2e3Q9QXZ7 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Nr2e3Q9QXZ7 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nr2e3Q9QXZ7 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nr2e3Q9QXZ7 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nr2e3Q9QXZ7 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.83■□□□□ 0.61
Nr2e3Q9QXZ7 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nr2e3Q9QXZ7 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nr2e3Q9QXZ7 Gm9013-201ENSMUST00000132939 882 ntBASIC18.83■□□□□ 0.6
Nr2e3Q9QXZ7 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.83■□□□□ 0.6
Nr2e3Q9QXZ7 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nr2e3Q9QXZ7 Gm5587-201ENSMUST00000206270 674 ntBASIC18.83■□□□□ 0.6
Nr2e3Q9QXZ7 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nr2e3Q9QXZ7 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.83■□□□□ 0.6
Nr2e3Q9QXZ7 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.83■□□□□ 0.6
Nr2e3Q9QXZ7 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Nr2e3Q9QXZ7 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nr2e3Q9QXZ7 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nr2e3Q9QXZ7 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nr2e3Q9QXZ7 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nr2e3Q9QXZ7 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nr2e3Q9QXZ7 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Nr2e3Q9QXZ7 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.83■□□□□ 0.6
Nr2e3Q9QXZ7 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nr2e3Q9QXZ7 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Nr2e3Q9QXZ7 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nr2e3Q9QXZ7 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Nr2e3Q9QXZ7 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Nr2e3Q9QXZ7 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Nr2e3Q9QXZ7 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nr2e3Q9QXZ7 Gm13216-201ENSMUST00000117145 591 ntBASIC18.82■□□□□ 0.6
Nr2e3Q9QXZ7 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.82■□□□□ 0.6
Nr2e3Q9QXZ7 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nr2e3Q9QXZ7 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.82■□□□□ 0.6
Nr2e3Q9QXZ7 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nr2e3Q9QXZ7 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nr2e3Q9QXZ7 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nr2e3Q9QXZ7 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nr2e3Q9QXZ7 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nr2e3Q9QXZ7 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nr2e3Q9QXZ7 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nr2e3Q9QXZ7 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nr2e3Q9QXZ7 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nr2e3Q9QXZ7 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms