Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Msh5Q9QUM7 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Msh5Q9QUM7 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Msh5Q9QUM7 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Msh5Q9QUM7 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Msh5Q9QUM7 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Msh5Q9QUM7 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Msh5Q9QUM7 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Msh5Q9QUM7 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Msh5Q9QUM7 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Msh5Q9QUM7 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Msh5Q9QUM7 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Msh5Q9QUM7 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Msh5Q9QUM7 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Msh5Q9QUM7 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.03■□□□□ 0.32
Msh5Q9QUM7 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Msh5Q9QUM7 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Msh5Q9QUM7 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Msh5Q9QUM7 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Msh5Q9QUM7 Gm37965-201ENSMUST00000195304 1362 ntBASIC17.02■□□□□ 0.32
Msh5Q9QUM7 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Msh5Q9QUM7 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Msh5Q9QUM7 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Msh5Q9QUM7 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Msh5Q9QUM7 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Msh5Q9QUM7 Gm24841-201ENSMUST00000158676 357 ntBASIC17.02■□□□□ 0.32
Msh5Q9QUM7 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.02■□□□□ 0.32
Msh5Q9QUM7 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC17.02■□□□□ 0.32
Msh5Q9QUM7 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC17.02■□□□□ 0.32
Msh5Q9QUM7 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Msh5Q9QUM7 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Msh5Q9QUM7 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Msh5Q9QUM7 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Msh5Q9QUM7 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Msh5Q9QUM7 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Msh5Q9QUM7 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Msh5Q9QUM7 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Msh5Q9QUM7 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Msh5Q9QUM7 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Msh5Q9QUM7 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Msh5Q9QUM7 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Msh5Q9QUM7 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Msh5Q9QUM7 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Msh5Q9QUM7 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.01■□□□□ 0.31
Msh5Q9QUM7 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Msh5Q9QUM7 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Msh5Q9QUM7 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Msh5Q9QUM7 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Msh5Q9QUM7 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Msh5Q9QUM7 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Msh5Q9QUM7 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Msh5Q9QUM7 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Msh5Q9QUM7 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Msh5Q9QUM7 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Msh5Q9QUM7 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Msh5Q9QUM7 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17■□□□□ 0.31
Msh5Q9QUM7 AC107452.3-201ENSMUST00000228807 1308 ntBASIC17■□□□□ 0.31
Msh5Q9QUM7 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Msh5Q9QUM7 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Msh5Q9QUM7 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Msh5Q9QUM7 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Msh5Q9QUM7 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Msh5Q9QUM7 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17■□□□□ 0.31
Msh5Q9QUM7 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17■□□□□ 0.31
Msh5Q9QUM7 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17■□□□□ 0.31
Msh5Q9QUM7 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17■□□□□ 0.31
Msh5Q9QUM7 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC17■□□□□ 0.31
Msh5Q9QUM7 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC17■□□□□ 0.31
Msh5Q9QUM7 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17■□□□□ 0.31
Msh5Q9QUM7 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Msh5Q9QUM7 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Msh5Q9QUM7 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Msh5Q9QUM7 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Msh5Q9QUM7 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17■□□□□ 0.31
Msh5Q9QUM7 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Msh5Q9QUM7 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Msh5Q9QUM7 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17■□□□□ 0.31
Msh5Q9QUM7 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Msh5Q9QUM7 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17■□□□□ 0.31
Msh5Q9QUM7 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17■□□□□ 0.31
Msh5Q9QUM7 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17■□□□□ 0.31
Msh5Q9QUM7 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Msh5Q9QUM7 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Msh5Q9QUM7 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Msh5Q9QUM7 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Msh5Q9QUM7 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Msh5Q9QUM7 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
Msh5Q9QUM7 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Msh5Q9QUM7 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Msh5Q9QUM7 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Msh5Q9QUM7 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Msh5Q9QUM7 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Msh5Q9QUM7 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Msh5Q9QUM7 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Msh5Q9QUM7 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.99■□□□□ 0.31
Msh5Q9QUM7 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
Msh5Q9QUM7 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.99■□□□□ 0.31
Msh5Q9QUM7 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.99■□□□□ 0.31
Msh5Q9QUM7 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.99■□□□□ 0.31
Msh5Q9QUM7 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms