Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup50Q9JIH2 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.6■□□□□ 0.41
Nup50Q9JIH2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.6■□□□□ 0.41
Nup50Q9JIH2 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.6■□□□□ 0.41
Nup50Q9JIH2 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.6■□□□□ 0.41
Nup50Q9JIH2 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.6■□□□□ 0.41
Nup50Q9JIH2 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.6■□□□□ 0.41
Nup50Q9JIH2 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.6■□□□□ 0.41
Nup50Q9JIH2 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nup50Q9JIH2 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Nup50Q9JIH2 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup50Q9JIH2 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup50Q9JIH2 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nup50Q9JIH2 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup50Q9JIH2 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup50Q9JIH2 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Nup50Q9JIH2 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup50Q9JIH2 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.6■□□□□ 0.41
Nup50Q9JIH2 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup50Q9JIH2 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup50Q9JIH2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Nup50Q9JIH2 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Nup50Q9JIH2 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nup50Q9JIH2 Dancr-204ENSMUST00000132389 2347 ntBASIC17.59■□□□□ 0.41
Nup50Q9JIH2 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nup50Q9JIH2 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nup50Q9JIH2 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nup50Q9JIH2 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Nup50Q9JIH2 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
Nup50Q9JIH2 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.59■□□□□ 0.41
Nup50Q9JIH2 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nup50Q9JIH2 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.59■□□□□ 0.41
Nup50Q9JIH2 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nup50Q9JIH2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nup50Q9JIH2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nup50Q9JIH2 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Nup50Q9JIH2 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nup50Q9JIH2 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nup50Q9JIH2 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nup50Q9JIH2 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nup50Q9JIH2 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nup50Q9JIH2 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nup50Q9JIH2 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nup50Q9JIH2 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nup50Q9JIH2 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Nup50Q9JIH2 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Nup50Q9JIH2 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nup50Q9JIH2 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nup50Q9JIH2 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.58■□□□□ 0.4
Nup50Q9JIH2 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.58■□□□□ 0.4
Nup50Q9JIH2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Nup50Q9JIH2 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nup50Q9JIH2 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nup50Q9JIH2 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Nup50Q9JIH2 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Nup50Q9JIH2 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Nup50Q9JIH2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nup50Q9JIH2 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Nup50Q9JIH2 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Nup50Q9JIH2 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nup50Q9JIH2 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nup50Q9JIH2 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nup50Q9JIH2 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nup50Q9JIH2 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
Nup50Q9JIH2 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nup50Q9JIH2 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nup50Q9JIH2 Gm27463-201ENSMUST00000183569 57 ntBASIC17.57■□□□□ 0.4
Nup50Q9JIH2 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.57■□□□□ 0.4
Nup50Q9JIH2 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nup50Q9JIH2 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.57■□□□□ 0.4
Nup50Q9JIH2 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nup50Q9JIH2 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nup50Q9JIH2 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Nup50Q9JIH2 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nup50Q9JIH2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Nup50Q9JIH2 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nup50Q9JIH2 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nup50Q9JIH2 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nup50Q9JIH2 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nup50Q9JIH2 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.56■□□□□ 0.4
Nup50Q9JIH2 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nup50Q9JIH2 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.56■□□□□ 0.4
Nup50Q9JIH2 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nup50Q9JIH2 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nup50Q9JIH2 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nup50Q9JIH2 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nup50Q9JIH2 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nup50Q9JIH2 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nup50Q9JIH2 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nup50Q9JIH2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
Nup50Q9JIH2 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nup50Q9JIH2 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.56■□□□□ 0.4
Nup50Q9JIH2 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nup50Q9JIH2 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Nup50Q9JIH2 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nup50Q9JIH2 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nup50Q9JIH2 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nup50Q9JIH2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nup50Q9JIH2 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nup50Q9JIH2 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms