Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ube3bQ9ES34 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
Ube3bQ9ES34 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ube3bQ9ES34 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ube3bQ9ES34 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ube3bQ9ES34 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Ube3bQ9ES34 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ube3bQ9ES34 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.79■□□□□ 0.76
Ube3bQ9ES34 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ube3bQ9ES34 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ube3bQ9ES34 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.79■□□□□ 0.76
Ube3bQ9ES34 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ube3bQ9ES34 Gm10052-201ENSMUST00000168019 960 ntBASIC19.79■□□□□ 0.76
Ube3bQ9ES34 Gm44430-201ENSMUST00000203376 995 ntBASIC19.79■□□□□ 0.76
Ube3bQ9ES34 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ube3bQ9ES34 Gm7729-201ENSMUST00000050143 801 ntBASIC19.79■□□□□ 0.76
Ube3bQ9ES34 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ube3bQ9ES34 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.79■□□□□ 0.76
Ube3bQ9ES34 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ube3bQ9ES34 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ube3bQ9ES34 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ube3bQ9ES34 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ube3bQ9ES34 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ube3bQ9ES34 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ube3bQ9ES34 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ube3bQ9ES34 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ube3bQ9ES34 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ube3bQ9ES34 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ube3bQ9ES34 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.78■□□□□ 0.76
Ube3bQ9ES34 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ube3bQ9ES34 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ube3bQ9ES34 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ube3bQ9ES34 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ube3bQ9ES34 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
Ube3bQ9ES34 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.78■□□□□ 0.76
Ube3bQ9ES34 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Ube3bQ9ES34 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.78■□□□□ 0.76
Ube3bQ9ES34 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ube3bQ9ES34 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ube3bQ9ES34 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.78■□□□□ 0.76
Ube3bQ9ES34 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ube3bQ9ES34 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Ube3bQ9ES34 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
Ube3bQ9ES34 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ube3bQ9ES34 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ube3bQ9ES34 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ube3bQ9ES34 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Ube3bQ9ES34 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Ube3bQ9ES34 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.77■□□□□ 0.76
Ube3bQ9ES34 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.77■□□□□ 0.76
Ube3bQ9ES34 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ube3bQ9ES34 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ube3bQ9ES34 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ube3bQ9ES34 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ube3bQ9ES34 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ube3bQ9ES34 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Ube3bQ9ES34 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ube3bQ9ES34 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ube3bQ9ES34 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ube3bQ9ES34 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Ube3bQ9ES34 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ube3bQ9ES34 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ube3bQ9ES34 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ube3bQ9ES34 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ube3bQ9ES34 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Ube3bQ9ES34 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC19.76■□□□□ 0.75
Ube3bQ9ES34 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ube3bQ9ES34 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ube3bQ9ES34 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ube3bQ9ES34 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Ube3bQ9ES34 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ube3bQ9ES34 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ube3bQ9ES34 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ube3bQ9ES34 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Ube3bQ9ES34 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ube3bQ9ES34 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Ube3bQ9ES34 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ube3bQ9ES34 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Ube3bQ9ES34 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Ube3bQ9ES34 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ube3bQ9ES34 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ube3bQ9ES34 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ube3bQ9ES34 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ube3bQ9ES34 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC19.75■□□□□ 0.75
Ube3bQ9ES34 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.75■□□□□ 0.75
Ube3bQ9ES34 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ube3bQ9ES34 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.75■□□□□ 0.75
Ube3bQ9ES34 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ube3bQ9ES34 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.75■□□□□ 0.75
Ube3bQ9ES34 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ube3bQ9ES34 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Ube3bQ9ES34 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ube3bQ9ES34 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.74■□□□□ 0.75
Ube3bQ9ES34 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.74■□□□□ 0.75
Ube3bQ9ES34 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ube3bQ9ES34 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ube3bQ9ES34 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ube3bQ9ES34 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ube3bQ9ES34 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ube3bQ9ES34 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms