Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.31■□□□□ 0.2
Rrp8Q9DB85 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rrp8Q9DB85 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rrp8Q9DB85 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
Rrp8Q9DB85 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rrp8Q9DB85 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rrp8Q9DB85 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rrp8Q9DB85 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.31■□□□□ 0.2
Rrp8Q9DB85 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp8Q9DB85 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp8Q9DB85 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rrp8Q9DB85 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp8Q9DB85 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp8Q9DB85 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp8Q9DB85 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp8Q9DB85 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp8Q9DB85 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp8Q9DB85 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp8Q9DB85 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp8Q9DB85 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp8Q9DB85 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp8Q9DB85 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp8Q9DB85 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.3■□□□□ 0.2
Rrp8Q9DB85 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp8Q9DB85 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp8Q9DB85 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp8Q9DB85 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp8Q9DB85 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rrp8Q9DB85 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Rrp8Q9DB85 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rrp8Q9DB85 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.29■□□□□ 0.2
Rrp8Q9DB85 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp8Q9DB85 Gm15165-201ENSMUST00000118140 502 ntBASIC16.29■□□□□ 0.2
Rrp8Q9DB85 Gm27867-201ENSMUST00000184778 125 ntBASIC16.29■□□□□ 0.2
Rrp8Q9DB85 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp8Q9DB85 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.29■□□□□ 0.2
Rrp8Q9DB85 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp8Q9DB85 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp8Q9DB85 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp8Q9DB85 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp8Q9DB85 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.29■□□□□ 0.2
Rrp8Q9DB85 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp8Q9DB85 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp8Q9DB85 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp8Q9DB85 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp8Q9DB85 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Rrp8Q9DB85 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rrp8Q9DB85 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp8Q9DB85 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp8Q9DB85 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rrp8Q9DB85 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp8Q9DB85 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp8Q9DB85 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.28■□□□□ 0.2
Rrp8Q9DB85 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp8Q9DB85 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp8Q9DB85 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp8Q9DB85 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp8Q9DB85 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp8Q9DB85 Gm44454-201ENSMUST00000198541 138 ntBASIC16.28■□□□□ 0.2
Rrp8Q9DB85 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rrp8Q9DB85 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.28■□□□□ 0.2
Rrp8Q9DB85 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.28■□□□□ 0.2
Rrp8Q9DB85 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp8Q9DB85 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp8Q9DB85 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rrp8Q9DB85 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp8Q9DB85 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp8Q9DB85 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp8Q9DB85 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rrp8Q9DB85 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rrp8Q9DB85 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Rrp8Q9DB85 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rrp8Q9DB85 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rrp8Q9DB85 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rrp8Q9DB85 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Rrp8Q9DB85 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Rrp8Q9DB85 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rrp8Q9DB85 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rrp8Q9DB85 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rrp8Q9DB85 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rrp8Q9DB85 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rrp8Q9DB85 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rrp8Q9DB85 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Rrp8Q9DB85 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rrp8Q9DB85 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.27■□□□□ 0.2
Rrp8Q9DB85 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.27■□□□□ 0.2
Rrp8Q9DB85 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rrp8Q9DB85 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rrp8Q9DB85 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rrp8Q9DB85 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rrp8Q9DB85 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rrp8Q9DB85 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rrp8Q9DB85 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rrp8Q9DB85 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rrp8Q9DB85 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.26■□□□□ 0.19
Rrp8Q9DB85 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Rrp8Q9DB85 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rrp8Q9DB85 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rrp8Q9DB85 Gm44430-201ENSMUST00000203376 995 ntBASIC16.26■□□□□ 0.19
Rrp8Q9DB85 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms