Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp2aQ9DB34 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp2aQ9DB34 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp2aQ9DB34 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp2aQ9DB34 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp2aQ9DB34 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Chmp2aQ9DB34 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp2aQ9DB34 Gm18101-201ENSMUST00000215769 548 ntBASIC17.41■□□□□ 0.38
Chmp2aQ9DB34 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp2aQ9DB34 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Chmp2aQ9DB34 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Chmp2aQ9DB34 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp2aQ9DB34 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp2aQ9DB34 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp2aQ9DB34 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp2aQ9DB34 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp2aQ9DB34 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp2aQ9DB34 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Chmp2aQ9DB34 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Chmp2aQ9DB34 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp2aQ9DB34 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp2aQ9DB34 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.4■□□□□ 0.38
Chmp2aQ9DB34 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp2aQ9DB34 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Chmp2aQ9DB34 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp2aQ9DB34 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp2aQ9DB34 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp2aQ9DB34 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp2aQ9DB34 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.4■□□□□ 0.38
Chmp2aQ9DB34 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Chmp2aQ9DB34 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Chmp2aQ9DB34 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.39■□□□□ 0.38
Chmp2aQ9DB34 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Chmp2aQ9DB34 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Chmp2aQ9DB34 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Chmp2aQ9DB34 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp2aQ9DB34 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp2aQ9DB34 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Chmp2aQ9DB34 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.39■□□□□ 0.37
Chmp2aQ9DB34 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp2aQ9DB34 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp2aQ9DB34 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp2aQ9DB34 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Chmp2aQ9DB34 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.39■□□□□ 0.37
Chmp2aQ9DB34 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp2aQ9DB34 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp2aQ9DB34 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp2aQ9DB34 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp2aQ9DB34 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Chmp2aQ9DB34 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp2aQ9DB34 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp2aQ9DB34 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Chmp2aQ9DB34 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.39■□□□□ 0.37
Chmp2aQ9DB34 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.39■□□□□ 0.37
Chmp2aQ9DB34 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp2aQ9DB34 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp2aQ9DB34 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.38■□□□□ 0.37
Chmp2aQ9DB34 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp2aQ9DB34 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.38■□□□□ 0.37
Chmp2aQ9DB34 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp2aQ9DB34 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.38■□□□□ 0.37
Chmp2aQ9DB34 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp2aQ9DB34 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.38■□□□□ 0.37
Chmp2aQ9DB34 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp2aQ9DB34 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Chmp2aQ9DB34 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.38■□□□□ 0.37
Chmp2aQ9DB34 Gm18032-201ENSMUST00000222541 538 ntBASIC17.38■□□□□ 0.37
Chmp2aQ9DB34 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp2aQ9DB34 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
Chmp2aQ9DB34 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp2aQ9DB34 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp2aQ9DB34 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp2aQ9DB34 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp2aQ9DB34 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Chmp2aQ9DB34 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp2aQ9DB34 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp2aQ9DB34 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Chmp2aQ9DB34 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp2aQ9DB34 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Chmp2aQ9DB34 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp2aQ9DB34 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp2aQ9DB34 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp2aQ9DB34 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.37■□□□□ 0.37
Chmp2aQ9DB34 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.37■□□□□ 0.37
Chmp2aQ9DB34 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp2aQ9DB34 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp2aQ9DB34 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Chmp2aQ9DB34 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp2aQ9DB34 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp2aQ9DB34 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Chmp2aQ9DB34 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp2aQ9DB34 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp2aQ9DB34 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp2aQ9DB34 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp2aQ9DB34 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.36■□□□□ 0.37
Chmp2aQ9DB34 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Chmp2aQ9DB34 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.36■□□□□ 0.37
Chmp2aQ9DB34 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp2aQ9DB34 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp2aQ9DB34 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms