Protein–RNA interactions for Protein: Q9D9M9

Rnf138rt1, RIKEN cDNA 1700045I19, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf138rt1Q9D9M9 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Rnf138rt1Q9D9M9 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rnf138rt1Q9D9M9 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rnf138rt1Q9D9M9 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rnf138rt1Q9D9M9 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rnf138rt1Q9D9M9 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Rnf138rt1Q9D9M9 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf138rt1Q9D9M9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf138rt1Q9D9M9 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Rnf138rt1Q9D9M9 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf138rt1Q9D9M9 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.51■□□□□ 0.39
Rnf138rt1Q9D9M9 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Rnf138rt1Q9D9M9 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf138rt1Q9D9M9 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf138rt1Q9D9M9 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf138rt1Q9D9M9 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.51■□□□□ 0.39
Rnf138rt1Q9D9M9 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.51■□□□□ 0.39
Rnf138rt1Q9D9M9 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf138rt1Q9D9M9 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf138rt1Q9D9M9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf138rt1Q9D9M9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf138rt1Q9D9M9 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf138rt1Q9D9M9 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Rnf138rt1Q9D9M9 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.51■□□□□ 0.39
Rnf138rt1Q9D9M9 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf138rt1Q9D9M9 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Rnf138rt1Q9D9M9 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.5■□□□□ 0.39
Rnf138rt1Q9D9M9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Rnf138rt1Q9D9M9 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf138rt1Q9D9M9 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf138rt1Q9D9M9 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf138rt1Q9D9M9 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf138rt1Q9D9M9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf138rt1Q9D9M9 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf138rt1Q9D9M9 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf138rt1Q9D9M9 Gm33142-201ENSMUST00000193913 867 ntBASIC17.5■□□□□ 0.39
Rnf138rt1Q9D9M9 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.5■□□□□ 0.39
Rnf138rt1Q9D9M9 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Rnf138rt1Q9D9M9 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf138rt1Q9D9M9 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf138rt1Q9D9M9 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
Rnf138rt1Q9D9M9 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf138rt1Q9D9M9 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf138rt1Q9D9M9 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf138rt1Q9D9M9 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.5■□□□□ 0.39
Rnf138rt1Q9D9M9 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf138rt1Q9D9M9 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf138rt1Q9D9M9 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.5■□□□□ 0.39
Rnf138rt1Q9D9M9 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.49■□□□□ 0.39
Rnf138rt1Q9D9M9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf138rt1Q9D9M9 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf138rt1Q9D9M9 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf138rt1Q9D9M9 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf138rt1Q9D9M9 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf138rt1Q9D9M9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Rnf138rt1Q9D9M9 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf138rt1Q9D9M9 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf138rt1Q9D9M9 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Rnf138rt1Q9D9M9 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Rnf138rt1Q9D9M9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf138rt1Q9D9M9 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Rnf138rt1Q9D9M9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf138rt1Q9D9M9 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf138rt1Q9D9M9 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf138rt1Q9D9M9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf138rt1Q9D9M9 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf138rt1Q9D9M9 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.48■□□□□ 0.39
Rnf138rt1Q9D9M9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf138rt1Q9D9M9 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf138rt1Q9D9M9 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.48■□□□□ 0.39
Rnf138rt1Q9D9M9 Gm36967-201ENSMUST00000193814 266 ntBASIC17.48■□□□□ 0.39
Rnf138rt1Q9D9M9 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf138rt1Q9D9M9 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf138rt1Q9D9M9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf138rt1Q9D9M9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf138rt1Q9D9M9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf138rt1Q9D9M9 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf138rt1Q9D9M9 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf138rt1Q9D9M9 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Rnf138rt1Q9D9M9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf138rt1Q9D9M9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf138rt1Q9D9M9 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf138rt1Q9D9M9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.47■□□□□ 0.39
Rnf138rt1Q9D9M9 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf138rt1Q9D9M9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf138rt1Q9D9M9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf138rt1Q9D9M9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf138rt1Q9D9M9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf138rt1Q9D9M9 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf138rt1Q9D9M9 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Rnf138rt1Q9D9M9 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.47■□□□□ 0.39
Rnf138rt1Q9D9M9 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf138rt1Q9D9M9 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf138rt1Q9D9M9 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf138rt1Q9D9M9 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf138rt1Q9D9M9 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.47■□□□□ 0.39
Rnf138rt1Q9D9M9 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf138rt1Q9D9M9 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf138rt1Q9D9M9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf138rt1Q9D9M9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms