Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp4cQ9D7F7 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp4cQ9D7F7 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp4cQ9D7F7 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp4cQ9D7F7 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp4cQ9D7F7 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp4cQ9D7F7 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp4cQ9D7F7 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp4cQ9D7F7 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp4cQ9D7F7 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp4cQ9D7F7 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
Chmp4cQ9D7F7 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
Chmp4cQ9D7F7 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.94■□□□□ 0.78
Chmp4cQ9D7F7 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp4cQ9D7F7 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp4cQ9D7F7 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp4cQ9D7F7 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp4cQ9D7F7 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp4cQ9D7F7 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp4cQ9D7F7 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp4cQ9D7F7 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp4cQ9D7F7 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.93■□□□□ 0.78
Chmp4cQ9D7F7 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp4cQ9D7F7 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp4cQ9D7F7 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp4cQ9D7F7 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp4cQ9D7F7 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Chmp4cQ9D7F7 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp4cQ9D7F7 Gm7638-201ENSMUST00000121348 967 ntBASIC19.93■□□□□ 0.78
Chmp4cQ9D7F7 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp4cQ9D7F7 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp4cQ9D7F7 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp4cQ9D7F7 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.93■□□□□ 0.78
Chmp4cQ9D7F7 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp4cQ9D7F7 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp4cQ9D7F7 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp4cQ9D7F7 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Chmp4cQ9D7F7 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Chmp4cQ9D7F7 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp4cQ9D7F7 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Chmp4cQ9D7F7 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp4cQ9D7F7 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp4cQ9D7F7 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Chmp4cQ9D7F7 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
Chmp4cQ9D7F7 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp4cQ9D7F7 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Chmp4cQ9D7F7 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp4cQ9D7F7 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp4cQ9D7F7 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp4cQ9D7F7 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp4cQ9D7F7 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp4cQ9D7F7 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp4cQ9D7F7 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.92■□□□□ 0.78
Chmp4cQ9D7F7 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.92■□□□□ 0.78
Chmp4cQ9D7F7 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp4cQ9D7F7 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.92■□□□□ 0.78
Chmp4cQ9D7F7 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Chmp4cQ9D7F7 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp4cQ9D7F7 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp4cQ9D7F7 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp4cQ9D7F7 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp4cQ9D7F7 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp4cQ9D7F7 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp4cQ9D7F7 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp4cQ9D7F7 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.91■□□□□ 0.78
Chmp4cQ9D7F7 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp4cQ9D7F7 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp4cQ9D7F7 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp4cQ9D7F7 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp4cQ9D7F7 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.91■□□□□ 0.78
Chmp4cQ9D7F7 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp4cQ9D7F7 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp4cQ9D7F7 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp4cQ9D7F7 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp4cQ9D7F7 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp4cQ9D7F7 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.91■□□□□ 0.78
Chmp4cQ9D7F7 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp4cQ9D7F7 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.91■□□□□ 0.78
Chmp4cQ9D7F7 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.91■□□□□ 0.78
Chmp4cQ9D7F7 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Chmp4cQ9D7F7 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.91■□□□□ 0.78
Chmp4cQ9D7F7 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp4cQ9D7F7 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC19.91■□□□□ 0.78
Chmp4cQ9D7F7 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp4cQ9D7F7 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp4cQ9D7F7 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp4cQ9D7F7 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp4cQ9D7F7 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp4cQ9D7F7 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp4cQ9D7F7 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp4cQ9D7F7 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp4cQ9D7F7 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp4cQ9D7F7 Gm13216-201ENSMUST00000117145 591 ntBASIC19.9■□□□□ 0.78
Chmp4cQ9D7F7 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.9■□□□□ 0.78
Chmp4cQ9D7F7 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Chmp4cQ9D7F7 Gm38027-201ENSMUST00000192315 235 ntBASIC19.9■□□□□ 0.78
Chmp4cQ9D7F7 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp4cQ9D7F7 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp4cQ9D7F7 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
Chmp4cQ9D7F7 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms