Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ndc80Q9D0F1 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ndc80Q9D0F1 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ndc80Q9D0F1 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ndc80Q9D0F1 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ndc80Q9D0F1 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ndc80Q9D0F1 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ndc80Q9D0F1 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ndc80Q9D0F1 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.96■□□□□ 0.31
Ndc80Q9D0F1 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ndc80Q9D0F1 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.96■□□□□ 0.31
Ndc80Q9D0F1 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.96■□□□□ 0.31
Ndc80Q9D0F1 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Ndc80Q9D0F1 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ndc80Q9D0F1 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ndc80Q9D0F1 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.96■□□□□ 0.31
Ndc80Q9D0F1 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ndc80Q9D0F1 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ndc80Q9D0F1 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ndc80Q9D0F1 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.96■□□□□ 0.31
Ndc80Q9D0F1 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ndc80Q9D0F1 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ndc80Q9D0F1 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ndc80Q9D0F1 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ndc80Q9D0F1 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ndc80Q9D0F1 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ndc80Q9D0F1 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Ndc80Q9D0F1 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
Ndc80Q9D0F1 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
Ndc80Q9D0F1 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ndc80Q9D0F1 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ndc80Q9D0F1 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ndc80Q9D0F1 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ndc80Q9D0F1 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ndc80Q9D0F1 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ndc80Q9D0F1 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ndc80Q9D0F1 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ndc80Q9D0F1 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ndc80Q9D0F1 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ndc80Q9D0F1 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Ndc80Q9D0F1 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ndc80Q9D0F1 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ndc80Q9D0F1 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.95■□□□□ 0.3
Ndc80Q9D0F1 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ndc80Q9D0F1 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.95■□□□□ 0.3
Ndc80Q9D0F1 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ndc80Q9D0F1 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ndc80Q9D0F1 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ndc80Q9D0F1 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ndc80Q9D0F1 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ndc80Q9D0F1 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ndc80Q9D0F1 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ndc80Q9D0F1 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ndc80Q9D0F1 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ndc80Q9D0F1 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ndc80Q9D0F1 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ndc80Q9D0F1 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ndc80Q9D0F1 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.94■□□□□ 0.3
Ndc80Q9D0F1 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ndc80Q9D0F1 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ndc80Q9D0F1 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.94■□□□□ 0.3
Ndc80Q9D0F1 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ndc80Q9D0F1 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ndc80Q9D0F1 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ndc80Q9D0F1 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ndc80Q9D0F1 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ndc80Q9D0F1 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ndc80Q9D0F1 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ndc80Q9D0F1 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ndc80Q9D0F1 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ndc80Q9D0F1 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Ndc80Q9D0F1 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ndc80Q9D0F1 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ndc80Q9D0F1 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ndc80Q9D0F1 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ndc80Q9D0F1 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ndc80Q9D0F1 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ndc80Q9D0F1 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ndc80Q9D0F1 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ndc80Q9D0F1 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ndc80Q9D0F1 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ndc80Q9D0F1 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.93■□□□□ 0.3
Ndc80Q9D0F1 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.93■□□□□ 0.3
Ndc80Q9D0F1 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ndc80Q9D0F1 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ndc80Q9D0F1 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ndc80Q9D0F1 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ndc80Q9D0F1 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.93■□□□□ 0.3
Ndc80Q9D0F1 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ndc80Q9D0F1 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ndc80Q9D0F1 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Ndc80Q9D0F1 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ndc80Q9D0F1 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ndc80Q9D0F1 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ndc80Q9D0F1 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ndc80Q9D0F1 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ndc80Q9D0F1 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ndc80Q9D0F1 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ndc80Q9D0F1 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ndc80Q9D0F1 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms