Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Gm27742-201ENSMUST00000184667 60 ntBASIC16.86■□□□□ 0.29
Lsm7Q9CQQ8 Gm29707-201ENSMUST00000196325 491 ntBASIC16.86■□□□□ 0.29
Lsm7Q9CQQ8 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm7Q9CQQ8 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.86■□□□□ 0.29
Lsm7Q9CQQ8 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm7Q9CQQ8 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm7Q9CQQ8 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm7Q9CQQ8 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm7Q9CQQ8 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Lsm7Q9CQQ8 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.86■□□□□ 0.29
Lsm7Q9CQQ8 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm7Q9CQQ8 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm7Q9CQQ8 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm7Q9CQQ8 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm7Q9CQQ8 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Lsm7Q9CQQ8 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm7Q9CQQ8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm7Q9CQQ8 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm7Q9CQQ8 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm7Q9CQQ8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm7Q9CQQ8 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Lsm7Q9CQQ8 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm7Q9CQQ8 Gm44450-201ENSMUST00000199528 114 ntBASIC16.85■□□□□ 0.29
Lsm7Q9CQQ8 Gm18421-201ENSMUST00000204122 625 ntBASIC16.85■□□□□ 0.29
Lsm7Q9CQQ8 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.85■□□□□ 0.29
Lsm7Q9CQQ8 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.85■□□□□ 0.29
Lsm7Q9CQQ8 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm7Q9CQQ8 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Lsm7Q9CQQ8 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm7Q9CQQ8 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm7Q9CQQ8 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm7Q9CQQ8 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm7Q9CQQ8 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm7Q9CQQ8 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm7Q9CQQ8 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm7Q9CQQ8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm7Q9CQQ8 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm7Q9CQQ8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.84■□□□□ 0.29
Lsm7Q9CQQ8 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.84■□□□□ 0.29
Lsm7Q9CQQ8 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.84■□□□□ 0.29
Lsm7Q9CQQ8 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm7Q9CQQ8 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm7Q9CQQ8 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm7Q9CQQ8 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm7Q9CQQ8 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm7Q9CQQ8 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm7Q9CQQ8 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.84■□□□□ 0.29
Lsm7Q9CQQ8 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.84■□□□□ 0.29
Lsm7Q9CQQ8 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm7Q9CQQ8 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm7Q9CQQ8 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm7Q9CQQ8 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm7Q9CQQ8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm7Q9CQQ8 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Lsm7Q9CQQ8 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm7Q9CQQ8 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm7Q9CQQ8 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm7Q9CQQ8 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.84■□□□□ 0.29
Lsm7Q9CQQ8 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm7Q9CQQ8 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Lsm7Q9CQQ8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm7Q9CQQ8 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm7Q9CQQ8 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Lsm7Q9CQQ8 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.83■□□□□ 0.28
Lsm7Q9CQQ8 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm7Q9CQQ8 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.83■□□□□ 0.28
Lsm7Q9CQQ8 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.83■□□□□ 0.28
Lsm7Q9CQQ8 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
Lsm7Q9CQQ8 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Lsm7Q9CQQ8 Mir3081-201ENSMUST00000175305 84 ntBASIC16.83■□□□□ 0.28
Lsm7Q9CQQ8 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm7Q9CQQ8 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.83■□□□□ 0.28
Lsm7Q9CQQ8 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm7Q9CQQ8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm7Q9CQQ8 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm7Q9CQQ8 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm7Q9CQQ8 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm7Q9CQQ8 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm7Q9CQQ8 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm7Q9CQQ8 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Lsm7Q9CQQ8 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm7Q9CQQ8 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm7Q9CQQ8 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Lsm7Q9CQQ8 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.82■□□□□ 0.28
Lsm7Q9CQQ8 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm7Q9CQQ8 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm7Q9CQQ8 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Lsm7Q9CQQ8 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Lsm7Q9CQQ8 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm7Q9CQQ8 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.82■□□□□ 0.28
Lsm7Q9CQQ8 Gm18669-201ENSMUST00000216049 778 ntBASIC16.82■□□□□ 0.28
Lsm7Q9CQQ8 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.82■□□□□ 0.28
Lsm7Q9CQQ8 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Lsm7Q9CQQ8 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.82■□□□□ 0.28
Lsm7Q9CQQ8 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm7Q9CQQ8 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm7Q9CQQ8 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm7Q9CQQ8 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm7Q9CQQ8 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Lsm7Q9CQQ8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms