Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.98■□□□□ 0.31
Cdh23Q99PF4 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.98■□□□□ 0.31
Cdh23Q99PF4 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh23Q99PF4 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh23Q99PF4 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh23Q99PF4 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
Cdh23Q99PF4 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Cdh23Q99PF4 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdh23Q99PF4 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Cdh23Q99PF4 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC16.97■□□□□ 0.31
Cdh23Q99PF4 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.97■□□□□ 0.31
Cdh23Q99PF4 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cdh23Q99PF4 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cdh23Q99PF4 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdh23Q99PF4 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.97■□□□□ 0.31
Cdh23Q99PF4 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cdh23Q99PF4 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdh23Q99PF4 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
Cdh23Q99PF4 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdh23Q99PF4 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Cdh23Q99PF4 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdh23Q99PF4 Gm11025-201ENSMUST00000140773 466 ntBASIC16.97■□□□□ 0.31
Cdh23Q99PF4 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cdh23Q99PF4 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.97■□□□□ 0.31
Cdh23Q99PF4 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.97■□□□□ 0.31
Cdh23Q99PF4 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdh23Q99PF4 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdh23Q99PF4 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdh23Q99PF4 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.96■□□□□ 0.31
Cdh23Q99PF4 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdh23Q99PF4 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.96■□□□□ 0.31
Cdh23Q99PF4 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdh23Q99PF4 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdh23Q99PF4 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdh23Q99PF4 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.96■□□□□ 0.31
Cdh23Q99PF4 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.96■□□□□ 0.31
Cdh23Q99PF4 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.96■□□□□ 0.31
Cdh23Q99PF4 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdh23Q99PF4 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Cdh23Q99PF4 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdh23Q99PF4 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdh23Q99PF4 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cdh23Q99PF4 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.95■□□□□ 0.3
Cdh23Q99PF4 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdh23Q99PF4 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.95■□□□□ 0.3
Cdh23Q99PF4 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.95■□□□□ 0.3
Cdh23Q99PF4 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.95■□□□□ 0.3
Cdh23Q99PF4 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdh23Q99PF4 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdh23Q99PF4 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cdh23Q99PF4 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Cdh23Q99PF4 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdh23Q99PF4 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.95■□□□□ 0.3
Cdh23Q99PF4 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdh23Q99PF4 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.95■□□□□ 0.3
Cdh23Q99PF4 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.95■□□□□ 0.3
Cdh23Q99PF4 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
Cdh23Q99PF4 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cdh23Q99PF4 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdh23Q99PF4 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cdh23Q99PF4 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cdh23Q99PF4 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cdh23Q99PF4 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdh23Q99PF4 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cdh23Q99PF4 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cdh23Q99PF4 Gm23547-201ENSMUST00000158210 271 ntBASIC16.94■□□□□ 0.3
Cdh23Q99PF4 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdh23Q99PF4 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Cdh23Q99PF4 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Cdh23Q99PF4 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdh23Q99PF4 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdh23Q99PF4 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdh23Q99PF4 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdh23Q99PF4 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.94■□□□□ 0.3
Cdh23Q99PF4 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cdh23Q99PF4 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdh23Q99PF4 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdh23Q99PF4 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdh23Q99PF4 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdh23Q99PF4 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Cdh23Q99PF4 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16.94■□□□□ 0.3
Cdh23Q99PF4 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.94■□□□□ 0.3
Cdh23Q99PF4 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Cdh23Q99PF4 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Cdh23Q99PF4 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdh23Q99PF4 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.93■□□□□ 0.3
Cdh23Q99PF4 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.93■□□□□ 0.3
Cdh23Q99PF4 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdh23Q99PF4 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Cdh23Q99PF4 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdh23Q99PF4 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdh23Q99PF4 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdh23Q99PF4 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Cdh23Q99PF4 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdh23Q99PF4 Gm5682-201ENSMUST00000173402 505 ntBASIC16.92■□□□□ 0.3
Cdh23Q99PF4 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.92■□□□□ 0.3
Cdh23Q99PF4 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.92■□□□□ 0.3
Cdh23Q99PF4 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.92■□□□□ 0.3
Cdh23Q99PF4 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.92■□□□□ 0.3
Cdh23Q99PF4 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms