Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh4Q99MT2 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh4Q99MT2 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.26■□□□□ 0.19
Msh4Q99MT2 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Msh4Q99MT2 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh4Q99MT2 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.26■□□□□ 0.19
Msh4Q99MT2 Gm2274-201ENSMUST00000184539 609 ntBASIC16.26■□□□□ 0.19
Msh4Q99MT2 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Msh4Q99MT2 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.26■□□□□ 0.19
Msh4Q99MT2 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh4Q99MT2 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh4Q99MT2 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh4Q99MT2 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Msh4Q99MT2 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh4Q99MT2 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Msh4Q99MT2 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Msh4Q99MT2 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh4Q99MT2 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Msh4Q99MT2 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.26■□□□□ 0.19
Msh4Q99MT2 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Msh4Q99MT2 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh4Q99MT2 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh4Q99MT2 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh4Q99MT2 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Msh4Q99MT2 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh4Q99MT2 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Msh4Q99MT2 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Msh4Q99MT2 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Msh4Q99MT2 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Msh4Q99MT2 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh4Q99MT2 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh4Q99MT2 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh4Q99MT2 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Msh4Q99MT2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh4Q99MT2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh4Q99MT2 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Msh4Q99MT2 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh4Q99MT2 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.25■□□□□ 0.19
Msh4Q99MT2 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh4Q99MT2 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh4Q99MT2 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.24■□□□□ 0.19
Msh4Q99MT2 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Msh4Q99MT2 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh4Q99MT2 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh4Q99MT2 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh4Q99MT2 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh4Q99MT2 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh4Q99MT2 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh4Q99MT2 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Msh4Q99MT2 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.24■□□□□ 0.19
Msh4Q99MT2 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh4Q99MT2 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh4Q99MT2 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Msh4Q99MT2 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh4Q99MT2 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Msh4Q99MT2 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh4Q99MT2 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh4Q99MT2 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh4Q99MT2 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Msh4Q99MT2 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Msh4Q99MT2 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Msh4Q99MT2 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.23■□□□□ 0.19
Msh4Q99MT2 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Msh4Q99MT2 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Msh4Q99MT2 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Msh4Q99MT2 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Msh4Q99MT2 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.23■□□□□ 0.19
Msh4Q99MT2 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Msh4Q99MT2 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.23■□□□□ 0.19
Msh4Q99MT2 Gm45058-201ENSMUST00000205810 766 ntBASIC16.23■□□□□ 0.19
Msh4Q99MT2 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Msh4Q99MT2 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Msh4Q99MT2 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Msh4Q99MT2 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Msh4Q99MT2 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Msh4Q99MT2 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Msh4Q99MT2 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Msh4Q99MT2 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Msh4Q99MT2 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.23■□□□□ 0.19
Msh4Q99MT2 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Msh4Q99MT2 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.22■□□□□ 0.19
Msh4Q99MT2 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.22■□□□□ 0.19
Msh4Q99MT2 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Msh4Q99MT2 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Msh4Q99MT2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Msh4Q99MT2 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Msh4Q99MT2 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Msh4Q99MT2 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Msh4Q99MT2 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Msh4Q99MT2 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Msh4Q99MT2 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Msh4Q99MT2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Msh4Q99MT2 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Msh4Q99MT2 Gm17661-201ENSMUST00000170317 270 ntBASIC16.22■□□□□ 0.19
Msh4Q99MT2 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Msh4Q99MT2 Mir5130-201ENSMUST00000175160 84 ntBASIC16.22■□□□□ 0.19
Msh4Q99MT2 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.22■□□□□ 0.19
Msh4Q99MT2 Il3ra-202ENSMUST00000223589 738 ntBASIC16.22■□□□□ 0.19
Msh4Q99MT2 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
Msh4Q99MT2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms