Protein–RNA interactions for Protein: Q99MS8

Tpgs1, Tubulin polyglutamylase complex subunit 1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpgs1Q99MS8 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tpgs1Q99MS8 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tpgs1Q99MS8 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tpgs1Q99MS8 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.37■□□□□ 0.37
Tpgs1Q99MS8 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tpgs1Q99MS8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.36■□□□□ 0.37
Tpgs1Q99MS8 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tpgs1Q99MS8 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Tpgs1Q99MS8 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Tpgs1Q99MS8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tpgs1Q99MS8 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tpgs1Q99MS8 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tpgs1Q99MS8 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tpgs1Q99MS8 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tpgs1Q99MS8 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tpgs1Q99MS8 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tpgs1Q99MS8 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tpgs1Q99MS8 Gm29518-201ENSMUST00000190858 372 ntBASIC17.36■□□□□ 0.37
Tpgs1Q99MS8 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Tpgs1Q99MS8 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tpgs1Q99MS8 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tpgs1Q99MS8 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tpgs1Q99MS8 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tpgs1Q99MS8 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tpgs1Q99MS8 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.36■□□□□ 0.37
Tpgs1Q99MS8 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tpgs1Q99MS8 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tpgs1Q99MS8 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tpgs1Q99MS8 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tpgs1Q99MS8 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
Tpgs1Q99MS8 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Tpgs1Q99MS8 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tpgs1Q99MS8 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Tpgs1Q99MS8 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tpgs1Q99MS8 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tpgs1Q99MS8 Gm11950-201ENSMUST00000121615 838 ntBASIC17.35■□□□□ 0.37
Tpgs1Q99MS8 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tpgs1Q99MS8 Gm6623-201ENSMUST00000173570 544 ntBASIC17.35■□□□□ 0.37
Tpgs1Q99MS8 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.35■□□□□ 0.37
Tpgs1Q99MS8 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tpgs1Q99MS8 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tpgs1Q99MS8 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tpgs1Q99MS8 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tpgs1Q99MS8 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tpgs1Q99MS8 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tpgs1Q99MS8 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tpgs1Q99MS8 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpgs1Q99MS8 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tpgs1Q99MS8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tpgs1Q99MS8 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tpgs1Q99MS8 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpgs1Q99MS8 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tpgs1Q99MS8 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.34■□□□□ 0.37
Tpgs1Q99MS8 Gm17808-201ENSMUST00000200859 894 ntBASIC17.34■□□□□ 0.37
Tpgs1Q99MS8 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Tpgs1Q99MS8 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpgs1Q99MS8 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpgs1Q99MS8 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpgs1Q99MS8 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpgs1Q99MS8 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tpgs1Q99MS8 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpgs1Q99MS8 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpgs1Q99MS8 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpgs1Q99MS8 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Tpgs1Q99MS8 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpgs1Q99MS8 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tpgs1Q99MS8 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Tpgs1Q99MS8 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Tpgs1Q99MS8 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
Tpgs1Q99MS8 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
Tpgs1Q99MS8 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tpgs1Q99MS8 Gm45328-201ENSMUST00000210942 917 ntBASIC17.33■□□□□ 0.36
Tpgs1Q99MS8 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tpgs1Q99MS8 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tpgs1Q99MS8 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tpgs1Q99MS8 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tpgs1Q99MS8 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Tpgs1Q99MS8 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tpgs1Q99MS8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Tpgs1Q99MS8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tpgs1Q99MS8 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.33■□□□□ 0.36
Tpgs1Q99MS8 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tpgs1Q99MS8 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tpgs1Q99MS8 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Tpgs1Q99MS8 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpgs1Q99MS8 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpgs1Q99MS8 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.32■□□□□ 0.36
Tpgs1Q99MS8 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpgs1Q99MS8 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpgs1Q99MS8 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpgs1Q99MS8 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpgs1Q99MS8 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpgs1Q99MS8 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpgs1Q99MS8 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpgs1Q99MS8 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpgs1Q99MS8 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.32■□□□□ 0.36
Tpgs1Q99MS8 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Tpgs1Q99MS8 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tpgs1Q99MS8 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpgs1Q99MS8 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms