Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.29■□□□□ 0.36
Cdk5rap3Q99LM2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.29■□□□□ 0.36
Cdk5rap3Q99LM2 Il3ra-202ENSMUST00000223589 738 ntBASIC17.29■□□□□ 0.36
Cdk5rap3Q99LM2 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.29■□□□□ 0.36
Cdk5rap3Q99LM2 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cdk5rap3Q99LM2 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk5rap3Q99LM2 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk5rap3Q99LM2 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk5rap3Q99LM2 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
Cdk5rap3Q99LM2 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk5rap3Q99LM2 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cdk5rap3Q99LM2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk5rap3Q99LM2 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cdk5rap3Q99LM2 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdk5rap3Q99LM2 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdk5rap3Q99LM2 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.28■□□□□ 0.36
Cdk5rap3Q99LM2 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdk5rap3Q99LM2 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.28■□□□□ 0.36
Cdk5rap3Q99LM2 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdk5rap3Q99LM2 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdk5rap3Q99LM2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdk5rap3Q99LM2 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdk5rap3Q99LM2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdk5rap3Q99LM2 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.28■□□□□ 0.36
Cdk5rap3Q99LM2 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cdk5rap3Q99LM2 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Cdk5rap3Q99LM2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdk5rap3Q99LM2 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdk5rap3Q99LM2 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cdk5rap3Q99LM2 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.28■□□□□ 0.36
Cdk5rap3Q99LM2 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdk5rap3Q99LM2 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdk5rap3Q99LM2 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdk5rap3Q99LM2 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Cdk5rap3Q99LM2 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdk5rap3Q99LM2 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cdk5rap3Q99LM2 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cdk5rap3Q99LM2 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdk5rap3Q99LM2 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdk5rap3Q99LM2 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdk5rap3Q99LM2 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cdk5rap3Q99LM2 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdk5rap3Q99LM2 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cdk5rap3Q99LM2 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Cdk5rap3Q99LM2 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdk5rap3Q99LM2 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.27■□□□□ 0.36
Cdk5rap3Q99LM2 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cdk5rap3Q99LM2 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdk5rap3Q99LM2 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdk5rap3Q99LM2 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.27■□□□□ 0.36
Cdk5rap3Q99LM2 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.27■□□□□ 0.36
Cdk5rap3Q99LM2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdk5rap3Q99LM2 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdk5rap3Q99LM2 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Cdk5rap3Q99LM2 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdk5rap3Q99LM2 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdk5rap3Q99LM2 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cdk5rap3Q99LM2 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdk5rap3Q99LM2 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.26■□□□□ 0.35
Cdk5rap3Q99LM2 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdk5rap3Q99LM2 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdk5rap3Q99LM2 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdk5rap3Q99LM2 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cdk5rap3Q99LM2 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdk5rap3Q99LM2 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdk5rap3Q99LM2 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdk5rap3Q99LM2 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Cdk5rap3Q99LM2 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Cdk5rap3Q99LM2 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.26■□□□□ 0.35
Cdk5rap3Q99LM2 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.26■□□□□ 0.35
Cdk5rap3Q99LM2 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cdk5rap3Q99LM2 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cdk5rap3Q99LM2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.26■□□□□ 0.35
Cdk5rap3Q99LM2 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdk5rap3Q99LM2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdk5rap3Q99LM2 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdk5rap3Q99LM2 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdk5rap3Q99LM2 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cdk5rap3Q99LM2 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdk5rap3Q99LM2 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdk5rap3Q99LM2 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdk5rap3Q99LM2 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdk5rap3Q99LM2 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdk5rap3Q99LM2 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdk5rap3Q99LM2 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdk5rap3Q99LM2 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdk5rap3Q99LM2 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdk5rap3Q99LM2 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdk5rap3Q99LM2 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdk5rap3Q99LM2 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdk5rap3Q99LM2 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Cdk5rap3Q99LM2 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdk5rap3Q99LM2 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdk5rap3Q99LM2 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdk5rap3Q99LM2 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdk5rap3Q99LM2 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cdk5rap3Q99LM2 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.25■□□□□ 0.35
Cdk5rap3Q99LM2 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.25■□□□□ 0.35
Cdk5rap3Q99LM2 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.25■□□□□ 0.35
Cdk5rap3Q99LM2 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms