Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Smarcd2Q99JR8 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcd2Q99JR8 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcd2Q99JR8 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd2Q99JR8 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd2Q99JR8 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd2Q99JR8 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd2Q99JR8 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd2Q99JR8 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Smarcd2Q99JR8 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd2Q99JR8 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd2Q99JR8 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd2Q99JR8 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd2Q99JR8 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd2Q99JR8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd2Q99JR8 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Smarcd2Q99JR8 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd2Q99JR8 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd2Q99JR8 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.82■□□□□ 0.28
Smarcd2Q99JR8 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Smarcd2Q99JR8 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd2Q99JR8 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd2Q99JR8 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd2Q99JR8 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd2Q99JR8 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd2Q99JR8 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd2Q99JR8 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcd2Q99JR8 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcd2Q99JR8 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.81■□□□□ 0.28
Smarcd2Q99JR8 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.81■□□□□ 0.28
Smarcd2Q99JR8 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcd2Q99JR8 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.81■□□□□ 0.28
Smarcd2Q99JR8 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcd2Q99JR8 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.81■□□□□ 0.28
Smarcd2Q99JR8 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcd2Q99JR8 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Smarcd2Q99JR8 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcd2Q99JR8 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcd2Q99JR8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcd2Q99JR8 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Smarcd2Q99JR8 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcd2Q99JR8 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.81■□□□□ 0.28
Smarcd2Q99JR8 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.81■□□□□ 0.28
Smarcd2Q99JR8 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
Smarcd2Q99JR8 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.81■□□□□ 0.28
Smarcd2Q99JR8 Gm27525-201ENSMUST00000184465 107 ntBASIC16.81■□□□□ 0.28
Smarcd2Q99JR8 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcd2Q99JR8 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcd2Q99JR8 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcd2Q99JR8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Smarcd2Q99JR8 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcd2Q99JR8 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcd2Q99JR8 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Smarcd2Q99JR8 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd2Q99JR8 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd2Q99JR8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd2Q99JR8 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.8■□□□□ 0.28
Smarcd2Q99JR8 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd2Q99JR8 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd2Q99JR8 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd2Q99JR8 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd2Q99JR8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd2Q99JR8 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.8■□□□□ 0.28
Smarcd2Q99JR8 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Smarcd2Q99JR8 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd2Q99JR8 Mir5131-201ENSMUST00000175426 93 ntBASIC16.8■□□□□ 0.28
Smarcd2Q99JR8 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd2Q99JR8 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.8■□□□□ 0.28
Smarcd2Q99JR8 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Smarcd2Q99JR8 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd2Q99JR8 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Smarcd2Q99JR8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd2Q99JR8 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Smarcd2Q99JR8 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd2Q99JR8 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd2Q99JR8 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd2Q99JR8 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd2Q99JR8 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.79■□□□□ 0.28
Smarcd2Q99JR8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcd2Q99JR8 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcd2Q99JR8 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
Smarcd2Q99JR8 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Smarcd2Q99JR8 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.79■□□□□ 0.28
Smarcd2Q99JR8 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcd2Q99JR8 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Smarcd2Q99JR8 Gm10060-201ENSMUST00000212002 111 ntBASIC16.79■□□□□ 0.28
Smarcd2Q99JR8 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.79■□□□□ 0.28
Smarcd2Q99JR8 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.79■□□□□ 0.28
Smarcd2Q99JR8 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcd2Q99JR8 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcd2Q99JR8 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Smarcd2Q99JR8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcd2Q99JR8 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcd2Q99JR8 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcd2Q99JR8 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcd2Q99JR8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd2Q99JR8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd2Q99JR8 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd2Q99JR8 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd2Q99JR8 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms