Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfc4Q99J62 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.18■□□□□ 0.66
Rfc4Q99J62 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Rfc4Q99J62 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfc4Q99J62 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfc4Q99J62 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfc4Q99J62 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfc4Q99J62 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfc4Q99J62 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfc4Q99J62 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.18■□□□□ 0.66
Rfc4Q99J62 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfc4Q99J62 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Rfc4Q99J62 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfc4Q99J62 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Rfc4Q99J62 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rfc4Q99J62 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rfc4Q99J62 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC19.17■□□□□ 0.66
Rfc4Q99J62 Gm44454-201ENSMUST00000198541 138 ntBASIC19.17■□□□□ 0.66
Rfc4Q99J62 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfc4Q99J62 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Rfc4Q99J62 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfc4Q99J62 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.17■□□□□ 0.66
Rfc4Q99J62 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Rfc4Q99J62 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfc4Q99J62 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rfc4Q99J62 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfc4Q99J62 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfc4Q99J62 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfc4Q99J62 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfc4Q99J62 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
Rfc4Q99J62 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rfc4Q99J62 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Rfc4Q99J62 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfc4Q99J62 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfc4Q99J62 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfc4Q99J62 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfc4Q99J62 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfc4Q99J62 Gm1401-201ENSMUST00000122048 772 ntBASIC19.16■□□□□ 0.66
Rfc4Q99J62 Gm8969-201ENSMUST00000199694 526 ntBASIC19.16■□□□□ 0.66
Rfc4Q99J62 Gm13830-205ENSMUST00000201195 1155 ntBASIC19.16■□□□□ 0.66
Rfc4Q99J62 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC19.16■□□□□ 0.66
Rfc4Q99J62 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC19.16■□□□□ 0.66
Rfc4Q99J62 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfc4Q99J62 Vti1a-206ENSMUST00000225529 1244 ntBASIC19.16■□□□□ 0.66
Rfc4Q99J62 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.16■□□□□ 0.66
Rfc4Q99J62 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfc4Q99J62 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfc4Q99J62 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfc4Q99J62 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfc4Q99J62 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rfc4Q99J62 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rfc4Q99J62 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfc4Q99J62 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rfc4Q99J62 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Rfc4Q99J62 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Rfc4Q99J62 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Rfc4Q99J62 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Rfc4Q99J62 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfc4Q99J62 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC19.15■□□□□ 0.66
Rfc4Q99J62 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rfc4Q99J62 Gm43073-201ENSMUST00000198200 1189 ntBASIC19.15■□□□□ 0.66
Rfc4Q99J62 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfc4Q99J62 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rfc4Q99J62 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rfc4Q99J62 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfc4Q99J62 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Rfc4Q99J62 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfc4Q99J62 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Rfc4Q99J62 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rfc4Q99J62 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Rfc4Q99J62 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rfc4Q99J62 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.14■□□□□ 0.65
Rfc4Q99J62 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.14■□□□□ 0.65
Rfc4Q99J62 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.14■□□□□ 0.65
Rfc4Q99J62 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC19.14■□□□□ 0.65
Rfc4Q99J62 Mir5131-201ENSMUST00000175426 93 ntBASIC19.14■□□□□ 0.65
Rfc4Q99J62 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
Rfc4Q99J62 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC19.14■□□□□ 0.65
Rfc4Q99J62 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Rfc4Q99J62 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rfc4Q99J62 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rfc4Q99J62 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rfc4Q99J62 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rfc4Q99J62 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rfc4Q99J62 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rfc4Q99J62 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Rfc4Q99J62 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rfc4Q99J62 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rfc4Q99J62 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC19.13■□□□□ 0.65
Rfc4Q99J62 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC19.13■□□□□ 0.65
Rfc4Q99J62 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfc4Q99J62 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Rfc4Q99J62 Gm18856-201ENSMUST00000178096 1374 ntBASIC19.13■□□□□ 0.65
Rfc4Q99J62 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfc4Q99J62 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.13■□□□□ 0.65
Rfc4Q99J62 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfc4Q99J62 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfc4Q99J62 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfc4Q99J62 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfc4Q99J62 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms