Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhga3Q91XY5 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhga3Q91XY5 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhga3Q91XY5 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhga3Q91XY5 Gm7638-201ENSMUST00000121348 967 ntBASIC14.87□□□□□ -0.03
Pcdhga3Q91XY5 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.87□□□□□ -0.03
Pcdhga3Q91XY5 Gm9731-201ENSMUST00000209480 747 ntBASIC14.87□□□□□ -0.03
Pcdhga3Q91XY5 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.87□□□□□ -0.03
Pcdhga3Q91XY5 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.87□□□□□ -0.03
Pcdhga3Q91XY5 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhga3Q91XY5 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhga3Q91XY5 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhga3Q91XY5 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhga3Q91XY5 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Pcdhga3Q91XY5 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhga3Q91XY5 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Pcdhga3Q91XY5 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhga3Q91XY5 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhga3Q91XY5 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Pcdhga3Q91XY5 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhga3Q91XY5 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhga3Q91XY5 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
Pcdhga3Q91XY5 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhga3Q91XY5 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.86□□□□□ -0.03
Pcdhga3Q91XY5 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.86□□□□□ -0.03
Pcdhga3Q91XY5 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhga3Q91XY5 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.86□□□□□ -0.03
Pcdhga3Q91XY5 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhga3Q91XY5 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhga3Q91XY5 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhga3Q91XY5 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhga3Q91XY5 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhga3Q91XY5 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.86□□□□□ -0.03
Pcdhga3Q91XY5 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.86□□□□□ -0.03
Pcdhga3Q91XY5 Mir5122-201ENSMUST00000175004 89 ntBASIC14.86□□□□□ -0.03
Pcdhga3Q91XY5 Gm21814-202ENSMUST00000203277 873 ntBASIC14.86□□□□□ -0.03
Pcdhga3Q91XY5 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.86□□□□□ -0.03
Pcdhga3Q91XY5 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.86□□□□□ -0.03
Pcdhga3Q91XY5 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.86□□□□□ -0.03
Pcdhga3Q91XY5 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhga3Q91XY5 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhga3Q91XY5 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Pcdhga3Q91XY5 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhga3Q91XY5 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Pcdhga3Q91XY5 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.86□□□□□ -0.03
Pcdhga3Q91XY5 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhga3Q91XY5 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Pcdhga3Q91XY5 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Pcdhga3Q91XY5 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhga3Q91XY5 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhga3Q91XY5 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhga3Q91XY5 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhga3Q91XY5 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga3Q91XY5 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga3Q91XY5 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Pcdhga3Q91XY5 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga3Q91XY5 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Pcdhga3Q91XY5 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga3Q91XY5 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga3Q91XY5 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga3Q91XY5 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Pcdhga3Q91XY5 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga3Q91XY5 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga3Q91XY5 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga3Q91XY5 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga3Q91XY5 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga3Q91XY5 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga3Q91XY5 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga3Q91XY5 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga3Q91XY5 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga3Q91XY5 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.85□□□□□ -0.03
Pcdhga3Q91XY5 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.85□□□□□ -0.03
Pcdhga3Q91XY5 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Pcdhga3Q91XY5 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga3Q91XY5 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga3Q91XY5 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga3Q91XY5 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga3Q91XY5 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga3Q91XY5 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga3Q91XY5 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.84□□□□□ -0.03
Pcdhga3Q91XY5 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga3Q91XY5 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga3Q91XY5 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Pcdhga3Q91XY5 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Pcdhga3Q91XY5 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga3Q91XY5 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga3Q91XY5 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Pcdhga3Q91XY5 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.84□□□□□ -0.03
Pcdhga3Q91XY5 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga3Q91XY5 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga3Q91XY5 Gm3375-201ENSMUST00000203929 796 ntBASIC14.84□□□□□ -0.03
Pcdhga3Q91XY5 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga3Q91XY5 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.84□□□□□ -0.03
Pcdhga3Q91XY5 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga3Q91XY5 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga3Q91XY5 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga3Q91XY5 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga3Q91XY5 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga3Q91XY5 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga3Q91XY5 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms