Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trex1Q91XB0 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC19.08■□□□□ 0.64
Trex1Q91XB0 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trex1Q91XB0 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trex1Q91XB0 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trex1Q91XB0 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trex1Q91XB0 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Trex1Q91XB0 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trex1Q91XB0 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.07■□□□□ 0.64
Trex1Q91XB0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trex1Q91XB0 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trex1Q91XB0 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trex1Q91XB0 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trex1Q91XB0 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Trex1Q91XB0 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trex1Q91XB0 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trex1Q91XB0 Gm6443-201ENSMUST00000203599 874 ntBASIC19.07■□□□□ 0.64
Trex1Q91XB0 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trex1Q91XB0 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC19.07■□□□□ 0.64
Trex1Q91XB0 AC160338.1-201ENSMUST00000214232 705 ntBASIC19.07■□□□□ 0.64
Trex1Q91XB0 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC19.07■□□□□ 0.64
Trex1Q91XB0 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.07■□□□□ 0.64
Trex1Q91XB0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Trex1Q91XB0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trex1Q91XB0 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trex1Q91XB0 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Trex1Q91XB0 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Trex1Q91XB0 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
Trex1Q91XB0 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trex1Q91XB0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trex1Q91XB0 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trex1Q91XB0 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC19.06■□□□□ 0.64
Trex1Q91XB0 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trex1Q91XB0 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC19.06■□□□□ 0.64
Trex1Q91XB0 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trex1Q91XB0 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC19.06■□□□□ 0.64
Trex1Q91XB0 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trex1Q91XB0 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
Trex1Q91XB0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trex1Q91XB0 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trex1Q91XB0 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trex1Q91XB0 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trex1Q91XB0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trex1Q91XB0 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trex1Q91XB0 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trex1Q91XB0 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC19.05■□□□□ 0.64
Trex1Q91XB0 Gm1818-201ENSMUST00000169406 1184 ntBASIC19.05■□□□□ 0.64
Trex1Q91XB0 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC19.05■□□□□ 0.64
Trex1Q91XB0 Gm43514-201ENSMUST00000198852 424 ntBASIC19.05■□□□□ 0.64
Trex1Q91XB0 AW822252-206ENSMUST00000208904 237 ntBASIC19.05■□□□□ 0.64
Trex1Q91XB0 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
Trex1Q91XB0 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC19.05■□□□□ 0.64
Trex1Q91XB0 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Trex1Q91XB0 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trex1Q91XB0 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trex1Q91XB0 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trex1Q91XB0 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trex1Q91XB0 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Trex1Q91XB0 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trex1Q91XB0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trex1Q91XB0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trex1Q91XB0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trex1Q91XB0 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trex1Q91XB0 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trex1Q91XB0 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trex1Q91XB0 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trex1Q91XB0 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trex1Q91XB0 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trex1Q91XB0 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC19.04■□□□□ 0.64
Trex1Q91XB0 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trex1Q91XB0 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trex1Q91XB0 Rps4l-201ENSMUST00000071745 943 ntBASIC19.04■□□□□ 0.64
Trex1Q91XB0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trex1Q91XB0 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trex1Q91XB0 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trex1Q91XB0 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trex1Q91XB0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Trex1Q91XB0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trex1Q91XB0 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trex1Q91XB0 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trex1Q91XB0 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trex1Q91XB0 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.03■□□□□ 0.64
Trex1Q91XB0 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trex1Q91XB0 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trex1Q91XB0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.03■□□□□ 0.64
Trex1Q91XB0 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trex1Q91XB0 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Trex1Q91XB0 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
Trex1Q91XB0 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Trex1Q91XB0 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC19.03■□□□□ 0.64
Trex1Q91XB0 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Trex1Q91XB0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trex1Q91XB0 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.03■□□□□ 0.64
Trex1Q91XB0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trex1Q91XB0 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trex1Q91XB0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trex1Q91XB0 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trex1Q91XB0 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.02■□□□□ 0.64
Trex1Q91XB0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trex1Q91XB0 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms