Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx41Q91VN6 Gm11355-201ENSMUST00000121120 306 ntBASIC19.11■□□□□ 0.65
Ddx41Q91VN6 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx41Q91VN6 Gm29518-201ENSMUST00000190858 372 ntBASIC19.11■□□□□ 0.65
Ddx41Q91VN6 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx41Q91VN6 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx41Q91VN6 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Ddx41Q91VN6 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx41Q91VN6 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Ddx41Q91VN6 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.11■□□□□ 0.65
Ddx41Q91VN6 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx41Q91VN6 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx41Q91VN6 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx41Q91VN6 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Ddx41Q91VN6 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx41Q91VN6 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx41Q91VN6 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Ddx41Q91VN6 Actl10-202ENSMUST00000226583 1501 ntBASIC19.1■□□□□ 0.65
Ddx41Q91VN6 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Ddx41Q91VN6 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx41Q91VN6 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx41Q91VN6 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx41Q91VN6 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx41Q91VN6 Gm7284-201ENSMUST00000131667 944 ntBASIC19.1■□□□□ 0.65
Ddx41Q91VN6 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx41Q91VN6 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.1■□□□□ 0.65
Ddx41Q91VN6 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx41Q91VN6 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.1■□□□□ 0.65
Ddx41Q91VN6 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.1■□□□□ 0.65
Ddx41Q91VN6 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx41Q91VN6 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx41Q91VN6 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx41Q91VN6 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx41Q91VN6 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx41Q91VN6 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Ddx41Q91VN6 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.1■□□□□ 0.65
Ddx41Q91VN6 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx41Q91VN6 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx41Q91VN6 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx41Q91VN6 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx41Q91VN6 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx41Q91VN6 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.1■□□□□ 0.65
Ddx41Q91VN6 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx41Q91VN6 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.09■□□□□ 0.65
Ddx41Q91VN6 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Ddx41Q91VN6 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx41Q91VN6 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx41Q91VN6 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Ddx41Q91VN6 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Ddx41Q91VN6 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx41Q91VN6 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
Ddx41Q91VN6 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx41Q91VN6 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Ddx41Q91VN6 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Ddx41Q91VN6 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Ddx41Q91VN6 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx41Q91VN6 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx41Q91VN6 Gm27704-201ENSMUST00000185094 107 ntBASIC19.09■□□□□ 0.65
Ddx41Q91VN6 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx41Q91VN6 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx41Q91VN6 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.09■□□□□ 0.65
Ddx41Q91VN6 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx41Q91VN6 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx41Q91VN6 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx41Q91VN6 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx41Q91VN6 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Ddx41Q91VN6 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx41Q91VN6 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx41Q91VN6 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx41Q91VN6 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC19.09■□□□□ 0.65
Ddx41Q91VN6 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ddx41Q91VN6 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Ddx41Q91VN6 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.08■□□□□ 0.65
Ddx41Q91VN6 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
Ddx41Q91VN6 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ddx41Q91VN6 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ddx41Q91VN6 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ddx41Q91VN6 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ddx41Q91VN6 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ddx41Q91VN6 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ddx41Q91VN6 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ddx41Q91VN6 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ddx41Q91VN6 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC19.08■□□□□ 0.64
Ddx41Q91VN6 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ddx41Q91VN6 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ddx41Q91VN6 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ddx41Q91VN6 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ddx41Q91VN6 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ddx41Q91VN6 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx41Q91VN6 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx41Q91VN6 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx41Q91VN6 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx41Q91VN6 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx41Q91VN6 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx41Q91VN6 Gm9103-201ENSMUST00000119371 405 ntBASIC19.07■□□□□ 0.64
Ddx41Q91VN6 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.07■□□□□ 0.64
Ddx41Q91VN6 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Ddx41Q91VN6 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx41Q91VN6 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx41Q91VN6 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms