Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb17Q91VD8 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb17Q91VD8 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb17Q91VD8 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb17Q91VD8 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Pcdhb17Q91VD8 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.31■□□□□ 0.36
Pcdhb17Q91VD8 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb17Q91VD8 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC17.31■□□□□ 0.36
Pcdhb17Q91VD8 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb17Q91VD8 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb17Q91VD8 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.31■□□□□ 0.36
Pcdhb17Q91VD8 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.31■□□□□ 0.36
Pcdhb17Q91VD8 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb17Q91VD8 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb17Q91VD8 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb17Q91VD8 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb17Q91VD8 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhb17Q91VD8 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb17Q91VD8 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Pcdhb17Q91VD8 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb17Q91VD8 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb17Q91VD8 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb17Q91VD8 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Pcdhb17Q91VD8 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb17Q91VD8 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb17Q91VD8 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb17Q91VD8 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb17Q91VD8 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Pcdhb17Q91VD8 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.3■□□□□ 0.36
Pcdhb17Q91VD8 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.3■□□□□ 0.36
Pcdhb17Q91VD8 Gm44450-201ENSMUST00000199528 114 ntBASIC17.3■□□□□ 0.36
Pcdhb17Q91VD8 Gm43974-201ENSMUST00000205080 684 ntBASIC17.3■□□□□ 0.36
Pcdhb17Q91VD8 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb17Q91VD8 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC17.3■□□□□ 0.36
Pcdhb17Q91VD8 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb17Q91VD8 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb17Q91VD8 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb17Q91VD8 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb17Q91VD8 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb17Q91VD8 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb17Q91VD8 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.29■□□□□ 0.36
Pcdhb17Q91VD8 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb17Q91VD8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pcdhb17Q91VD8 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb17Q91VD8 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb17Q91VD8 Gm11355-201ENSMUST00000121120 306 ntBASIC17.29■□□□□ 0.36
Pcdhb17Q91VD8 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.29■□□□□ 0.36
Pcdhb17Q91VD8 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb17Q91VD8 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Pcdhb17Q91VD8 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb17Q91VD8 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb17Q91VD8 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb17Q91VD8 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb17Q91VD8 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.29■□□□□ 0.36
Pcdhb17Q91VD8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb17Q91VD8 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pcdhb17Q91VD8 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb17Q91VD8 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb17Q91VD8 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb17Q91VD8 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb17Q91VD8 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Pcdhb17Q91VD8 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb17Q91VD8 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.28■□□□□ 0.36
Pcdhb17Q91VD8 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Pcdhb17Q91VD8 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb17Q91VD8 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb17Q91VD8 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb17Q91VD8 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb17Q91VD8 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Pcdhb17Q91VD8 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb17Q91VD8 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC17.28■□□□□ 0.36
Pcdhb17Q91VD8 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb17Q91VD8 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Pcdhb17Q91VD8 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.28■□□□□ 0.36
Pcdhb17Q91VD8 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.28■□□□□ 0.36
Pcdhb17Q91VD8 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Pcdhb17Q91VD8 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.28■□□□□ 0.36
Pcdhb17Q91VD8 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb17Q91VD8 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb17Q91VD8 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Pcdhb17Q91VD8 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb17Q91VD8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb17Q91VD8 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb17Q91VD8 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Pcdhb17Q91VD8 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb17Q91VD8 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb17Q91VD8 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb17Q91VD8 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Pcdhb17Q91VD8 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.27■□□□□ 0.36
Pcdhb17Q91VD8 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb17Q91VD8 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb17Q91VD8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Pcdhb17Q91VD8 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Pcdhb17Q91VD8 Gm11336-201ENSMUST00000118168 334 ntBASIC17.27■□□□□ 0.36
Pcdhb17Q91VD8 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb17Q91VD8 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.27■□□□□ 0.36
Pcdhb17Q91VD8 Gm37722-201ENSMUST00000193757 208 ntBASIC17.27■□□□□ 0.36
Pcdhb17Q91VD8 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC17.27■□□□□ 0.36
Pcdhb17Q91VD8 Gm45925-201ENSMUST00000218882 744 ntBASIC17.27■□□□□ 0.36
Pcdhb17Q91VD8 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms