Protein–RNA interactions for Protein: Q91V48

Pcdhb21, MCG1033322, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb21Q91V48 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb21Q91V48 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb21Q91V48 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pcdhb21Q91V48 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb21Q91V48 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb21Q91V48 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb21Q91V48 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb21Q91V48 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb21Q91V48 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb21Q91V48 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pcdhb21Q91V48 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.53■□□□□ 0.24
Pcdhb21Q91V48 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb21Q91V48 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb21Q91V48 Gm10013-201ENSMUST00000106074 672 ntBASIC16.53■□□□□ 0.24
Pcdhb21Q91V48 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Pcdhb21Q91V48 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.53■□□□□ 0.24
Pcdhb21Q91V48 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.53■□□□□ 0.24
Pcdhb21Q91V48 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.53■□□□□ 0.24
Pcdhb21Q91V48 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.53■□□□□ 0.24
Pcdhb21Q91V48 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb21Q91V48 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb21Q91V48 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb21Q91V48 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb21Q91V48 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb21Q91V48 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb21Q91V48 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Pcdhb21Q91V48 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb21Q91V48 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.53■□□□□ 0.24
Pcdhb21Q91V48 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb21Q91V48 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb21Q91V48 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb21Q91V48 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb21Q91V48 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb21Q91V48 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb21Q91V48 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb21Q91V48 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb21Q91V48 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb21Q91V48 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb21Q91V48 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Pcdhb21Q91V48 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb21Q91V48 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb21Q91V48 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Pcdhb21Q91V48 Gm22697-201ENSMUST00000175194 63 ntBASIC16.52■□□□□ 0.24
Pcdhb21Q91V48 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb21Q91V48 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.52■□□□□ 0.24
Pcdhb21Q91V48 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.52■□□□□ 0.24
Pcdhb21Q91V48 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.52■□□□□ 0.24
Pcdhb21Q91V48 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Pcdhb21Q91V48 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb21Q91V48 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb21Q91V48 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb21Q91V48 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb21Q91V48 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb21Q91V48 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb21Q91V48 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Pcdhb21Q91V48 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Pcdhb21Q91V48 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb21Q91V48 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb21Q91V48 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb21Q91V48 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb21Q91V48 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb21Q91V48 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb21Q91V48 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Pcdhb21Q91V48 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb21Q91V48 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb21Q91V48 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.51■□□□□ 0.23
Pcdhb21Q91V48 Gm10231-201ENSMUST00000181584 441 ntBASIC16.51■□□□□ 0.23
Pcdhb21Q91V48 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb21Q91V48 Gm10175-202ENSMUST00000208752 441 ntBASIC16.51■□□□□ 0.23
Pcdhb21Q91V48 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Pcdhb21Q91V48 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb21Q91V48 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.51■□□□□ 0.23
Pcdhb21Q91V48 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb21Q91V48 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb21Q91V48 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb21Q91V48 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb21Q91V48 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb21Q91V48 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Pcdhb21Q91V48 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb21Q91V48 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb21Q91V48 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Pcdhb21Q91V48 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Pcdhb21Q91V48 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb21Q91V48 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb21Q91V48 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb21Q91V48 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Pcdhb21Q91V48 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb21Q91V48 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb21Q91V48 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb21Q91V48 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb21Q91V48 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb21Q91V48 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb21Q91V48 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb21Q91V48 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Pcdhb21Q91V48 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Pcdhb21Q91V48 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb21Q91V48 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb21Q91V48 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Pcdhb21Q91V48 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.5■□□□□ 0.23
Pcdhb21Q91V48 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms