Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Vopp1Q8R1C3 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vopp1Q8R1C3 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vopp1Q8R1C3 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vopp1Q8R1C3 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vopp1Q8R1C3 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vopp1Q8R1C3 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.65■□□□□ 0.42
Vopp1Q8R1C3 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vopp1Q8R1C3 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vopp1Q8R1C3 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vopp1Q8R1C3 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vopp1Q8R1C3 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vopp1Q8R1C3 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vopp1Q8R1C3 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.65■□□□□ 0.42
Vopp1Q8R1C3 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vopp1Q8R1C3 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vopp1Q8R1C3 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.65■□□□□ 0.42
Vopp1Q8R1C3 Gm27525-201ENSMUST00000184465 107 ntBASIC17.65■□□□□ 0.42
Vopp1Q8R1C3 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Vopp1Q8R1C3 Gm7506-201ENSMUST00000207758 815 ntBASIC17.65■□□□□ 0.42
Vopp1Q8R1C3 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.65■□□□□ 0.42
Vopp1Q8R1C3 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.65■□□□□ 0.42
Vopp1Q8R1C3 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vopp1Q8R1C3 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vopp1Q8R1C3 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vopp1Q8R1C3 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Vopp1Q8R1C3 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.65■□□□□ 0.42
Vopp1Q8R1C3 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vopp1Q8R1C3 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Vopp1Q8R1C3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.65■□□□□ 0.42
Vopp1Q8R1C3 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vopp1Q8R1C3 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vopp1Q8R1C3 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vopp1Q8R1C3 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Vopp1Q8R1C3 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Vopp1Q8R1C3 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Vopp1Q8R1C3 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Vopp1Q8R1C3 Gm25745-201ENSMUST00000174945 133 ntBASIC17.64■□□□□ 0.41
Vopp1Q8R1C3 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.64■□□□□ 0.41
Vopp1Q8R1C3 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.64■□□□□ 0.41
Vopp1Q8R1C3 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vopp1Q8R1C3 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vopp1Q8R1C3 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.64■□□□□ 0.41
Vopp1Q8R1C3 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vopp1Q8R1C3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vopp1Q8R1C3 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vopp1Q8R1C3 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vopp1Q8R1C3 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Vopp1Q8R1C3 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vopp1Q8R1C3 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vopp1Q8R1C3 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.63■□□□□ 0.41
Vopp1Q8R1C3 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.63■□□□□ 0.41
Vopp1Q8R1C3 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vopp1Q8R1C3 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vopp1Q8R1C3 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vopp1Q8R1C3 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vopp1Q8R1C3 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vopp1Q8R1C3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Vopp1Q8R1C3 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vopp1Q8R1C3 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.62■□□□□ 0.41
Vopp1Q8R1C3 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vopp1Q8R1C3 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vopp1Q8R1C3 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vopp1Q8R1C3 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vopp1Q8R1C3 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vopp1Q8R1C3 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.62■□□□□ 0.41
Vopp1Q8R1C3 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.62■□□□□ 0.41
Vopp1Q8R1C3 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.62■□□□□ 0.41
Vopp1Q8R1C3 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Vopp1Q8R1C3 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vopp1Q8R1C3 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vopp1Q8R1C3 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.62■□□□□ 0.41
Vopp1Q8R1C3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vopp1Q8R1C3 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vopp1Q8R1C3 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vopp1Q8R1C3 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Vopp1Q8R1C3 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.62■□□□□ 0.41
Vopp1Q8R1C3 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.61■□□□□ 0.41
Vopp1Q8R1C3 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.61■□□□□ 0.41
Vopp1Q8R1C3 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
Vopp1Q8R1C3 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vopp1Q8R1C3 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vopp1Q8R1C3 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Vopp1Q8R1C3 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vopp1Q8R1C3 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.61■□□□□ 0.41
Vopp1Q8R1C3 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vopp1Q8R1C3 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Vopp1Q8R1C3 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vopp1Q8R1C3 Gm6376-201ENSMUST00000209407 580 ntBASIC17.61■□□□□ 0.41
Vopp1Q8R1C3 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vopp1Q8R1C3 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vopp1Q8R1C3 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vopp1Q8R1C3 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vopp1Q8R1C3 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Vopp1Q8R1C3 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vopp1Q8R1C3 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Vopp1Q8R1C3 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vopp1Q8R1C3 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.61■□□□□ 0.41
Vopp1Q8R1C3 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vopp1Q8R1C3 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms