Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf4Q8K4J2 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf4Q8K4J2 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf4Q8K4J2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf4Q8K4J2 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf4Q8K4J2 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ebf4Q8K4J2 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf4Q8K4J2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf4Q8K4J2 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf4Q8K4J2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf4Q8K4J2 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf4Q8K4J2 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.26■□□□□ 0.03
Ebf4Q8K4J2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf4Q8K4J2 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf4Q8K4J2 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf4Q8K4J2 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Ebf4Q8K4J2 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf4Q8K4J2 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf4Q8K4J2 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf4Q8K4J2 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf4Q8K4J2 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.25■□□□□ 0.03
Ebf4Q8K4J2 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf4Q8K4J2 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf4Q8K4J2 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf4Q8K4J2 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf4Q8K4J2 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.25■□□□□ 0.03
Ebf4Q8K4J2 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf4Q8K4J2 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf4Q8K4J2 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ebf4Q8K4J2 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf4Q8K4J2 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf4Q8K4J2 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf4Q8K4J2 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf4Q8K4J2 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf4Q8K4J2 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf4Q8K4J2 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf4Q8K4J2 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf4Q8K4J2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf4Q8K4J2 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf4Q8K4J2 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ebf4Q8K4J2 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf4Q8K4J2 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Ebf4Q8K4J2 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf4Q8K4J2 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ebf4Q8K4J2 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC15.24■□□□□ 0.03
Ebf4Q8K4J2 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.24■□□□□ 0.03
Ebf4Q8K4J2 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.24■□□□□ 0.03
Ebf4Q8K4J2 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.24■□□□□ 0.03
Ebf4Q8K4J2 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf4Q8K4J2 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf4Q8K4J2 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ebf4Q8K4J2 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf4Q8K4J2 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf4Q8K4J2 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.24■□□□□ 0.03
Ebf4Q8K4J2 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf4Q8K4J2 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf4Q8K4J2 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf4Q8K4J2 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.23■□□□□ 0.03
Ebf4Q8K4J2 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ebf4Q8K4J2 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf4Q8K4J2 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf4Q8K4J2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf4Q8K4J2 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf4Q8K4J2 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf4Q8K4J2 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf4Q8K4J2 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf4Q8K4J2 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.23■□□□□ 0.03
Ebf4Q8K4J2 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf4Q8K4J2 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf4Q8K4J2 Gm21168-201ENSMUST00000199646 1096 ntBASIC15.23■□□□□ 0.03
Ebf4Q8K4J2 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf4Q8K4J2 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf4Q8K4J2 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf4Q8K4J2 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf4Q8K4J2 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf4Q8K4J2 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf4Q8K4J2 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Ebf4Q8K4J2 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ebf4Q8K4J2 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf4Q8K4J2 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf4Q8K4J2 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf4Q8K4J2 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf4Q8K4J2 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf4Q8K4J2 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf4Q8K4J2 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf4Q8K4J2 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf4Q8K4J2 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf4Q8K4J2 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf4Q8K4J2 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf4Q8K4J2 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf4Q8K4J2 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf4Q8K4J2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ebf4Q8K4J2 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.22■□□□□ 0.03
Ebf4Q8K4J2 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf4Q8K4J2 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf4Q8K4J2 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf4Q8K4J2 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf4Q8K4J2 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf4Q8K4J2 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf4Q8K4J2 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms