Protein–RNA interactions for Protein: Q8CIR4

Trpm6, Transient receptor potential cation channel subfamily M member 6, mousemouse

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm6Q8CIR4 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trpm6Q8CIR4 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trpm6Q8CIR4 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trpm6Q8CIR4 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trpm6Q8CIR4 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trpm6Q8CIR4 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trpm6Q8CIR4 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trpm6Q8CIR4 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trpm6Q8CIR4 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trpm6Q8CIR4 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trpm6Q8CIR4 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trpm6Q8CIR4 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trpm6Q8CIR4 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trpm6Q8CIR4 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.68■□□□□ 0.26
Trpm6Q8CIR4 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trpm6Q8CIR4 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trpm6Q8CIR4 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.68■□□□□ 0.26
Trpm6Q8CIR4 Gm43514-201ENSMUST00000198852 424 ntBASIC16.68■□□□□ 0.26
Trpm6Q8CIR4 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.68■□□□□ 0.26
Trpm6Q8CIR4 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trpm6Q8CIR4 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trpm6Q8CIR4 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.68■□□□□ 0.26
Trpm6Q8CIR4 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trpm6Q8CIR4 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trpm6Q8CIR4 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trpm6Q8CIR4 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trpm6Q8CIR4 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trpm6Q8CIR4 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trpm6Q8CIR4 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trpm6Q8CIR4 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.67■□□□□ 0.26
Trpm6Q8CIR4 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.67■□□□□ 0.26
Trpm6Q8CIR4 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trpm6Q8CIR4 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trpm6Q8CIR4 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trpm6Q8CIR4 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trpm6Q8CIR4 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trpm6Q8CIR4 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Trpm6Q8CIR4 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trpm6Q8CIR4 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trpm6Q8CIR4 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trpm6Q8CIR4 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trpm6Q8CIR4 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trpm6Q8CIR4 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trpm6Q8CIR4 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trpm6Q8CIR4 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trpm6Q8CIR4 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trpm6Q8CIR4 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trpm6Q8CIR4 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.67■□□□□ 0.26
Trpm6Q8CIR4 Gm6376-201ENSMUST00000209407 580 ntBASIC16.67■□□□□ 0.26
Trpm6Q8CIR4 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trpm6Q8CIR4 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Trpm6Q8CIR4 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trpm6Q8CIR4 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trpm6Q8CIR4 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trpm6Q8CIR4 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trpm6Q8CIR4 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trpm6Q8CIR4 Gm13312-201ENSMUST00000119631 718 ntBASIC16.66■□□□□ 0.26
Trpm6Q8CIR4 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.66■□□□□ 0.26
Trpm6Q8CIR4 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.66■□□□□ 0.26
Trpm6Q8CIR4 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Trpm6Q8CIR4 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.66■□□□□ 0.26
Trpm6Q8CIR4 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trpm6Q8CIR4 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trpm6Q8CIR4 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trpm6Q8CIR4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.66■□□□□ 0.26
Trpm6Q8CIR4 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trpm6Q8CIR4 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trpm6Q8CIR4 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trpm6Q8CIR4 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trpm6Q8CIR4 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trpm6Q8CIR4 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.65■□□□□ 0.26
Trpm6Q8CIR4 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trpm6Q8CIR4 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.65■□□□□ 0.26
Trpm6Q8CIR4 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trpm6Q8CIR4 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.65■□□□□ 0.26
Trpm6Q8CIR4 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.65■□□□□ 0.26
Trpm6Q8CIR4 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trpm6Q8CIR4 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trpm6Q8CIR4 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trpm6Q8CIR4 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trpm6Q8CIR4 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Trpm6Q8CIR4 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trpm6Q8CIR4 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trpm6Q8CIR4 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trpm6Q8CIR4 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trpm6Q8CIR4 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trpm6Q8CIR4 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.65■□□□□ 0.26
Trpm6Q8CIR4 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trpm6Q8CIR4 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trpm6Q8CIR4 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Trpm6Q8CIR4 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trpm6Q8CIR4 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trpm6Q8CIR4 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trpm6Q8CIR4 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trpm6Q8CIR4 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trpm6Q8CIR4 Rarb-207ENSMUST00000225921 2756 ntBASIC16.65■□□□□ 0.26
Trpm6Q8CIR4 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.65■□□□□ 0.26
Trpm6Q8CIR4 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Trpm6Q8CIR4 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trpm6Q8CIR4 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms