Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfwd3Q8CIK8 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfwd3Q8CIK8 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfwd3Q8CIK8 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfwd3Q8CIK8 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfwd3Q8CIK8 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfwd3Q8CIK8 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Rfwd3Q8CIK8 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfwd3Q8CIK8 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfwd3Q8CIK8 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Rfwd3Q8CIK8 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfwd3Q8CIK8 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rfwd3Q8CIK8 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfwd3Q8CIK8 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfwd3Q8CIK8 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfwd3Q8CIK8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfwd3Q8CIK8 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfwd3Q8CIK8 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.69■□□□□ 0.1
Rfwd3Q8CIK8 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfwd3Q8CIK8 Gm10231-201ENSMUST00000181584 441 ntBASIC15.69■□□□□ 0.1
Rfwd3Q8CIK8 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfwd3Q8CIK8 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.69■□□□□ 0.1
Rfwd3Q8CIK8 Gm10175-202ENSMUST00000208752 441 ntBASIC15.69■□□□□ 0.1
Rfwd3Q8CIK8 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.69■□□□□ 0.1
Rfwd3Q8CIK8 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfwd3Q8CIK8 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfwd3Q8CIK8 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Rfwd3Q8CIK8 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.69■□□□□ 0.1
Rfwd3Q8CIK8 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfwd3Q8CIK8 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rfwd3Q8CIK8 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfwd3Q8CIK8 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfwd3Q8CIK8 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rfwd3Q8CIK8 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfwd3Q8CIK8 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.68■□□□□ 0.1
Rfwd3Q8CIK8 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rfwd3Q8CIK8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfwd3Q8CIK8 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Rfwd3Q8CIK8 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfwd3Q8CIK8 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfwd3Q8CIK8 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.68■□□□□ 0.1
Rfwd3Q8CIK8 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfwd3Q8CIK8 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfwd3Q8CIK8 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfwd3Q8CIK8 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfwd3Q8CIK8 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfwd3Q8CIK8 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfwd3Q8CIK8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rfwd3Q8CIK8 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Rfwd3Q8CIK8 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rfwd3Q8CIK8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rfwd3Q8CIK8 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfwd3Q8CIK8 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfwd3Q8CIK8 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfwd3Q8CIK8 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfwd3Q8CIK8 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfwd3Q8CIK8 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfwd3Q8CIK8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Rfwd3Q8CIK8 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfwd3Q8CIK8 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Rfwd3Q8CIK8 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfwd3Q8CIK8 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfwd3Q8CIK8 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rfwd3Q8CIK8 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Rfwd3Q8CIK8 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rfwd3Q8CIK8 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfwd3Q8CIK8 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfwd3Q8CIK8 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Rfwd3Q8CIK8 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.67■□□□□ 0.1
Rfwd3Q8CIK8 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfwd3Q8CIK8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rfwd3Q8CIK8 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.67■□□□□ 0.1
Rfwd3Q8CIK8 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfwd3Q8CIK8 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rfwd3Q8CIK8 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rfwd3Q8CIK8 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfwd3Q8CIK8 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rfwd3Q8CIK8 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.67■□□□□ 0.1
Rfwd3Q8CIK8 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfwd3Q8CIK8 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Rfwd3Q8CIK8 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rfwd3Q8CIK8 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.67■□□□□ 0.1
Rfwd3Q8CIK8 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfwd3Q8CIK8 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfwd3Q8CIK8 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfwd3Q8CIK8 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Rfwd3Q8CIK8 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Rfwd3Q8CIK8 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfwd3Q8CIK8 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfwd3Q8CIK8 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.67■□□□□ 0.1
Rfwd3Q8CIK8 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Rfwd3Q8CIK8 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfwd3Q8CIK8 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rfwd3Q8CIK8 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Rfwd3Q8CIK8 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rfwd3Q8CIK8 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Rfwd3Q8CIK8 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rfwd3Q8CIK8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.66■□□□□ 0.1
Rfwd3Q8CIK8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Rfwd3Q8CIK8 Gm13836-201ENSMUST00000121159 501 ntBASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms