Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Vps50Q8CI71 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Vps50Q8CI71 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps50Q8CI71 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps50Q8CI71 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps50Q8CI71 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps50Q8CI71 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.41■□□□□ 0.22
Vps50Q8CI71 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vps50Q8CI71 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vps50Q8CI71 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.41■□□□□ 0.22
Vps50Q8CI71 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.41■□□□□ 0.22
Vps50Q8CI71 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps50Q8CI71 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vps50Q8CI71 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps50Q8CI71 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.41■□□□□ 0.22
Vps50Q8CI71 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps50Q8CI71 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.41■□□□□ 0.22
Vps50Q8CI71 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vps50Q8CI71 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.41■□□□□ 0.22
Vps50Q8CI71 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Vps50Q8CI71 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps50Q8CI71 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Vps50Q8CI71 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Vps50Q8CI71 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.4■□□□□ 0.22
Vps50Q8CI71 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps50Q8CI71 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.4■□□□□ 0.22
Vps50Q8CI71 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.4■□□□□ 0.22
Vps50Q8CI71 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Vps50Q8CI71 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps50Q8CI71 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.4■□□□□ 0.22
Vps50Q8CI71 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Vps50Q8CI71 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps50Q8CI71 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.4■□□□□ 0.22
Vps50Q8CI71 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps50Q8CI71 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Vps50Q8CI71 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps50Q8CI71 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.4■□□□□ 0.22
Vps50Q8CI71 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps50Q8CI71 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.4■□□□□ 0.22
Vps50Q8CI71 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps50Q8CI71 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps50Q8CI71 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps50Q8CI71 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps50Q8CI71 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps50Q8CI71 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Vps50Q8CI71 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Vps50Q8CI71 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.39■□□□□ 0.21
Vps50Q8CI71 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps50Q8CI71 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps50Q8CI71 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.39■□□□□ 0.21
Vps50Q8CI71 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps50Q8CI71 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Vps50Q8CI71 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Vps50Q8CI71 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Vps50Q8CI71 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Vps50Q8CI71 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Vps50Q8CI71 Gm27463-201ENSMUST00000183569 57 ntBASIC16.39■□□□□ 0.21
Vps50Q8CI71 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Vps50Q8CI71 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Vps50Q8CI71 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.39■□□□□ 0.21
Vps50Q8CI71 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.39■□□□□ 0.21
Vps50Q8CI71 Gm43799-201ENSMUST00000201845 579 ntBASIC16.39■□□□□ 0.21
Vps50Q8CI71 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.39■□□□□ 0.21
Vps50Q8CI71 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Vps50Q8CI71 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps50Q8CI71 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps50Q8CI71 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps50Q8CI71 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps50Q8CI71 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps50Q8CI71 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps50Q8CI71 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Vps50Q8CI71 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps50Q8CI71 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps50Q8CI71 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps50Q8CI71 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Vps50Q8CI71 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps50Q8CI71 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps50Q8CI71 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Vps50Q8CI71 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps50Q8CI71 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps50Q8CI71 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps50Q8CI71 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Vps50Q8CI71 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps50Q8CI71 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps50Q8CI71 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vps50Q8CI71 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.38■□□□□ 0.21
Vps50Q8CI71 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.38■□□□□ 0.21
Vps50Q8CI71 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Vps50Q8CI71 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.38■□□□□ 0.21
Vps50Q8CI71 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.38■□□□□ 0.21
Vps50Q8CI71 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps50Q8CI71 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps50Q8CI71 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps50Q8CI71 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps50Q8CI71 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps50Q8CI71 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps50Q8CI71 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Vps50Q8CI71 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.37■□□□□ 0.21
Vps50Q8CI71 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps50Q8CI71 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms