Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Gm18669-201ENSMUST00000216049 778 ntBASIC19.71■□□□□ 0.75
Rbm28Q8CGC6 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rbm28Q8CGC6 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rbm28Q8CGC6 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rbm28Q8CGC6 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Rbm28Q8CGC6 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Rbm28Q8CGC6 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rbm28Q8CGC6 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Rbm28Q8CGC6 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rbm28Q8CGC6 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.7■□□□□ 0.74
Rbm28Q8CGC6 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rbm28Q8CGC6 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Rbm28Q8CGC6 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rbm28Q8CGC6 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rbm28Q8CGC6 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rbm28Q8CGC6 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rbm28Q8CGC6 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rbm28Q8CGC6 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rbm28Q8CGC6 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.7■□□□□ 0.74
Rbm28Q8CGC6 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rbm28Q8CGC6 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rbm28Q8CGC6 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rbm28Q8CGC6 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rbm28Q8CGC6 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rbm28Q8CGC6 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rbm28Q8CGC6 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC19.7■□□□□ 0.74
Rbm28Q8CGC6 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rbm28Q8CGC6 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC19.69■□□□□ 0.74
Rbm28Q8CGC6 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rbm28Q8CGC6 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rbm28Q8CGC6 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rbm28Q8CGC6 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rbm28Q8CGC6 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19.69■□□□□ 0.74
Rbm28Q8CGC6 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.69■□□□□ 0.74
Rbm28Q8CGC6 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rbm28Q8CGC6 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rbm28Q8CGC6 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rbm28Q8CGC6 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rbm28Q8CGC6 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.68■□□□□ 0.74
Rbm28Q8CGC6 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rbm28Q8CGC6 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rbm28Q8CGC6 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rbm28Q8CGC6 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Rbm28Q8CGC6 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Rbm28Q8CGC6 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.68■□□□□ 0.74
Rbm28Q8CGC6 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rbm28Q8CGC6 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Rbm28Q8CGC6 Gm27357-201ENSMUST00000183754 135 ntBASIC19.68■□□□□ 0.74
Rbm28Q8CGC6 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.68■□□□□ 0.74
Rbm28Q8CGC6 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rbm28Q8CGC6 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rbm28Q8CGC6 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rbm28Q8CGC6 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rbm28Q8CGC6 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rbm28Q8CGC6 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rbm28Q8CGC6 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rbm28Q8CGC6 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rbm28Q8CGC6 Gm27742-201ENSMUST00000184667 60 ntBASIC19.67■□□□□ 0.74
Rbm28Q8CGC6 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
Rbm28Q8CGC6 Gm45328-201ENSMUST00000210942 917 ntBASIC19.67■□□□□ 0.74
Rbm28Q8CGC6 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.67■□□□□ 0.74
Rbm28Q8CGC6 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rbm28Q8CGC6 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rbm28Q8CGC6 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rbm28Q8CGC6 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.67■□□□□ 0.74
Rbm28Q8CGC6 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Rbm28Q8CGC6 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rbm28Q8CGC6 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rbm28Q8CGC6 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rbm28Q8CGC6 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rbm28Q8CGC6 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Rbm28Q8CGC6 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rbm28Q8CGC6 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rbm28Q8CGC6 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rbm28Q8CGC6 Mir3081-201ENSMUST00000175305 84 ntBASIC19.66■□□□□ 0.74
Rbm28Q8CGC6 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rbm28Q8CGC6 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Rbm28Q8CGC6 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rbm28Q8CGC6 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Rbm28Q8CGC6 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Rbm28Q8CGC6 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rbm28Q8CGC6 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rbm28Q8CGC6 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rbm28Q8CGC6 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rbm28Q8CGC6 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rbm28Q8CGC6 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rbm28Q8CGC6 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.65■□□□□ 0.74
Rbm28Q8CGC6 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rbm28Q8CGC6 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rbm28Q8CGC6 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rbm28Q8CGC6 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rbm28Q8CGC6 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rbm28Q8CGC6 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rbm28Q8CGC6 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Rbm28Q8CGC6 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.65■□□□□ 0.74
Rbm28Q8CGC6 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.65■□□□□ 0.74
Rbm28Q8CGC6 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rbm28Q8CGC6 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Rbm28Q8CGC6 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rbm28Q8CGC6 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms