Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Smc4Q8CG47 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Smc4Q8CG47 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smc4Q8CG47 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Smc4Q8CG47 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Smc4Q8CG47 Gfra2-202ENSMUST00000227633 1480 ntBASIC20.56■□□□□ 0.88
Smc4Q8CG47 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.56■□□□□ 0.88
Smc4Q8CG47 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smc4Q8CG47 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smc4Q8CG47 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smc4Q8CG47 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Smc4Q8CG47 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smc4Q8CG47 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.55■□□□□ 0.88
Smc4Q8CG47 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smc4Q8CG47 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC20.55■□□□□ 0.88
Smc4Q8CG47 Olfr129-201ENSMUST00000122318 993 ntBASIC20.55■□□□□ 0.88
Smc4Q8CG47 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC20.55■□□□□ 0.88
Smc4Q8CG47 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smc4Q8CG47 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC20.55■□□□□ 0.88
Smc4Q8CG47 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Smc4Q8CG47 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smc4Q8CG47 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smc4Q8CG47 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smc4Q8CG47 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Smc4Q8CG47 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smc4Q8CG47 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Smc4Q8CG47 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smc4Q8CG47 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc4Q8CG47 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC20.54■□□□□ 0.88
Smc4Q8CG47 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc4Q8CG47 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Smc4Q8CG47 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc4Q8CG47 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Smc4Q8CG47 Gm28033-201ENSMUST00000184224 96 ntBASIC20.54■□□□□ 0.88
Smc4Q8CG47 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Smc4Q8CG47 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc4Q8CG47 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc4Q8CG47 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc4Q8CG47 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Smc4Q8CG47 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Smc4Q8CG47 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Smc4Q8CG47 Gm11620-201ENSMUST00000118770 1845 ntBASIC20.53■□□□□ 0.88
Smc4Q8CG47 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smc4Q8CG47 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smc4Q8CG47 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smc4Q8CG47 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smc4Q8CG47 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smc4Q8CG47 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Smc4Q8CG47 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
Smc4Q8CG47 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Smc4Q8CG47 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Smc4Q8CG47 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smc4Q8CG47 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Smc4Q8CG47 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smc4Q8CG47 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Smc4Q8CG47 Gm45203-201ENSMUST00000206384 1831 ntBASIC20.53■□□□□ 0.88
Smc4Q8CG47 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
Smc4Q8CG47 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smc4Q8CG47 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Smc4Q8CG47 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smc4Q8CG47 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smc4Q8CG47 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smc4Q8CG47 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smc4Q8CG47 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smc4Q8CG47 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smc4Q8CG47 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC20.52■□□□□ 0.88
Smc4Q8CG47 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Smc4Q8CG47 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smc4Q8CG47 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC20.52■□□□□ 0.88
Smc4Q8CG47 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smc4Q8CG47 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smc4Q8CG47 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smc4Q8CG47 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smc4Q8CG47 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smc4Q8CG47 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Smc4Q8CG47 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smc4Q8CG47 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Smc4Q8CG47 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smc4Q8CG47 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smc4Q8CG47 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Smc4Q8CG47 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC20.51■□□□□ 0.87
Smc4Q8CG47 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smc4Q8CG47 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smc4Q8CG47 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smc4Q8CG47 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smc4Q8CG47 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Smc4Q8CG47 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smc4Q8CG47 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smc4Q8CG47 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC20.5■□□□□ 0.87
Smc4Q8CG47 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Smc4Q8CG47 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Smc4Q8CG47 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
Smc4Q8CG47 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smc4Q8CG47 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.5■□□□□ 0.87
Smc4Q8CG47 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smc4Q8CG47 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smc4Q8CG47 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smc4Q8CG47 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC20.49■□□□□ 0.87
Smc4Q8CG47 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smc4Q8CG47 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms