Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smc5Q8CG46 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smc5Q8CG46 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smc5Q8CG46 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smc5Q8CG46 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Smc5Q8CG46 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC20.65■□□□□ 0.9
Smc5Q8CG46 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smc5Q8CG46 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smc5Q8CG46 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smc5Q8CG46 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smc5Q8CG46 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smc5Q8CG46 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smc5Q8CG46 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.9
Smc5Q8CG46 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.9
Smc5Q8CG46 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smc5Q8CG46 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smc5Q8CG46 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smc5Q8CG46 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Smc5Q8CG46 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20.64■□□□□ 0.89
Smc5Q8CG46 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Smc5Q8CG46 Gm18958-201ENSMUST00000174258 762 ntBASIC20.64■□□□□ 0.89
Smc5Q8CG46 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smc5Q8CG46 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smc5Q8CG46 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smc5Q8CG46 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smc5Q8CG46 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC20.64■□□□□ 0.89
Smc5Q8CG46 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Smc5Q8CG46 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Smc5Q8CG46 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smc5Q8CG46 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smc5Q8CG46 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smc5Q8CG46 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smc5Q8CG46 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smc5Q8CG46 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.63■□□□□ 0.89
Smc5Q8CG46 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smc5Q8CG46 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smc5Q8CG46 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Smc5Q8CG46 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smc5Q8CG46 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smc5Q8CG46 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smc5Q8CG46 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smc5Q8CG46 Gfra2-202ENSMUST00000227633 1480 ntBASIC20.62■□□□□ 0.89
Smc5Q8CG46 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smc5Q8CG46 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smc5Q8CG46 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smc5Q8CG46 Gm16011-201ENSMUST00000121567 2662 ntBASIC20.62■□□□□ 0.89
Smc5Q8CG46 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smc5Q8CG46 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smc5Q8CG46 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smc5Q8CG46 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smc5Q8CG46 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Smc5Q8CG46 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smc5Q8CG46 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc5Q8CG46 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc5Q8CG46 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc5Q8CG46 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc5Q8CG46 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc5Q8CG46 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc5Q8CG46 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc5Q8CG46 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Smc5Q8CG46 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC20.61■□□□□ 0.89
Smc5Q8CG46 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc5Q8CG46 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc5Q8CG46 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc5Q8CG46 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Smc5Q8CG46 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Smc5Q8CG46 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Smc5Q8CG46 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC20.61■□□□□ 0.89
Smc5Q8CG46 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc5Q8CG46 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc5Q8CG46 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC20.61■□□□□ 0.89
Smc5Q8CG46 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smc5Q8CG46 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smc5Q8CG46 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smc5Q8CG46 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Smc5Q8CG46 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Smc5Q8CG46 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Smc5Q8CG46 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smc5Q8CG46 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smc5Q8CG46 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smc5Q8CG46 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smc5Q8CG46 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smc5Q8CG46 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smc5Q8CG46 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Smc5Q8CG46 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smc5Q8CG46 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smc5Q8CG46 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Smc5Q8CG46 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smc5Q8CG46 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smc5Q8CG46 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Smc5Q8CG46 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Smc5Q8CG46 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smc5Q8CG46 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smc5Q8CG46 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smc5Q8CG46 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smc5Q8CG46 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Smc5Q8CG46 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smc5Q8CG46 Mir1199-201ENSMUST00000117015 119 ntBASIC20.59■□□□□ 0.89
Smc5Q8CG46 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Smc5Q8CG46 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms