Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Alx1Q8C8B0 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Alx1Q8C8B0 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Alx1Q8C8B0 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Alx1Q8C8B0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Alx1Q8C8B0 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Alx1Q8C8B0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Alx1Q8C8B0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Alx1Q8C8B0 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.46■□□□□ 0.71
Alx1Q8C8B0 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.46■□□□□ 0.71
Alx1Q8C8B0 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Alx1Q8C8B0 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Alx1Q8C8B0 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Alx1Q8C8B0 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Alx1Q8C8B0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Alx1Q8C8B0 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Alx1Q8C8B0 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Alx1Q8C8B0 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Alx1Q8C8B0 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Alx1Q8C8B0 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Alx1Q8C8B0 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Alx1Q8C8B0 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Alx1Q8C8B0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Alx1Q8C8B0 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Alx1Q8C8B0 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Alx1Q8C8B0 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Alx1Q8C8B0 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Alx1Q8C8B0 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Alx1Q8C8B0 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Alx1Q8C8B0 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Alx1Q8C8B0 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Alx1Q8C8B0 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Alx1Q8C8B0 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Alx1Q8C8B0 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Alx1Q8C8B0 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Alx1Q8C8B0 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Alx1Q8C8B0 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Alx1Q8C8B0 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Alx1Q8C8B0 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Alx1Q8C8B0 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Alx1Q8C8B0 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Alx1Q8C8B0 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Alx1Q8C8B0 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Alx1Q8C8B0 Gm27742-201ENSMUST00000184667 60 ntBASIC19.44■□□□□ 0.7
Alx1Q8C8B0 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Alx1Q8C8B0 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Alx1Q8C8B0 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Alx1Q8C8B0 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Alx1Q8C8B0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.44■□□□□ 0.7
Alx1Q8C8B0 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Alx1Q8C8B0 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Alx1Q8C8B0 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Alx1Q8C8B0 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Alx1Q8C8B0 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Alx1Q8C8B0 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Alx1Q8C8B0 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Alx1Q8C8B0 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Alx1Q8C8B0 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Alx1Q8C8B0 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Alx1Q8C8B0 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Alx1Q8C8B0 Olfr129-201ENSMUST00000122318 993 ntBASIC19.43■□□□□ 0.7
Alx1Q8C8B0 Gm7284-201ENSMUST00000131667 944 ntBASIC19.43■□□□□ 0.7
Alx1Q8C8B0 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC19.43■□□□□ 0.7
Alx1Q8C8B0 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Alx1Q8C8B0 Gm36967-201ENSMUST00000193814 266 ntBASIC19.43■□□□□ 0.7
Alx1Q8C8B0 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Alx1Q8C8B0 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Alx1Q8C8B0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Alx1Q8C8B0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Alx1Q8C8B0 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Alx1Q8C8B0 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Alx1Q8C8B0 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Alx1Q8C8B0 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Alx1Q8C8B0 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Alx1Q8C8B0 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Alx1Q8C8B0 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC19.42■□□□□ 0.7
Alx1Q8C8B0 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Alx1Q8C8B0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Alx1Q8C8B0 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Alx1Q8C8B0 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Alx1Q8C8B0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Alx1Q8C8B0 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Alx1Q8C8B0 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Alx1Q8C8B0 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Alx1Q8C8B0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Alx1Q8C8B0 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Alx1Q8C8B0 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Alx1Q8C8B0 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Alx1Q8C8B0 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Alx1Q8C8B0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Alx1Q8C8B0 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Alx1Q8C8B0 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Alx1Q8C8B0 Gm44430-201ENSMUST00000203376 995 ntBASIC19.41■□□□□ 0.7
Alx1Q8C8B0 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Alx1Q8C8B0 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Alx1Q8C8B0 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Alx1Q8C8B0 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Alx1Q8C8B0 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.41■□□□□ 0.7
Alx1Q8C8B0 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Alx1Q8C8B0 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms