Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc60Q8C4J0 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Ccdc60Q8C4J0 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc60Q8C4J0 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc60Q8C4J0 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ccdc60Q8C4J0 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc60Q8C4J0 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc60Q8C4J0 Gm6659-201ENSMUST00000174752 547 ntBASIC21.28■■□□□ 1
Ccdc60Q8C4J0 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc60Q8C4J0 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc60Q8C4J0 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc60Q8C4J0 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Ccdc60Q8C4J0 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc60Q8C4J0 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC21.27■■□□□ 1
Ccdc60Q8C4J0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc60Q8C4J0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Ccdc60Q8C4J0 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC21.27■■□□□ 1
Ccdc60Q8C4J0 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC21.27■■□□□ 1
Ccdc60Q8C4J0 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC21.27■■□□□ 1
Ccdc60Q8C4J0 Gm37722-201ENSMUST00000193757 208 ntBASIC21.27■■□□□ 1
Ccdc60Q8C4J0 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc60Q8C4J0 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc60Q8C4J0 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc60Q8C4J0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
Ccdc60Q8C4J0 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc60Q8C4J0 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Ccdc60Q8C4J0 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc60Q8C4J0 Gm8839-201ENSMUST00000121279 1645 ntBASIC21.26■□□□□ 0.99
Ccdc60Q8C4J0 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc60Q8C4J0 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc60Q8C4J0 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc60Q8C4J0 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc60Q8C4J0 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc60Q8C4J0 Gm11355-201ENSMUST00000121120 306 ntBASIC21.26■□□□□ 0.99
Ccdc60Q8C4J0 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Ccdc60Q8C4J0 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc60Q8C4J0 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc60Q8C4J0 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc60Q8C4J0 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc60Q8C4J0 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc60Q8C4J0 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc60Q8C4J0 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc60Q8C4J0 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc60Q8C4J0 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Ccdc60Q8C4J0 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc60Q8C4J0 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc60Q8C4J0 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC21.25■□□□□ 0.99
Ccdc60Q8C4J0 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc60Q8C4J0 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC21.25■□□□□ 0.99
Ccdc60Q8C4J0 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc60Q8C4J0 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc60Q8C4J0 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc60Q8C4J0 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Ccdc60Q8C4J0 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc60Q8C4J0 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC21.25■□□□□ 0.99
Ccdc60Q8C4J0 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc60Q8C4J0 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc60Q8C4J0 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Ccdc60Q8C4J0 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Ccdc60Q8C4J0 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Ccdc60Q8C4J0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc60Q8C4J0 Gm26596-201ENSMUST00000180464 2655 ntBASIC21.24■□□□□ 0.99
Ccdc60Q8C4J0 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc60Q8C4J0 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc60Q8C4J0 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc60Q8C4J0 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc60Q8C4J0 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc60Q8C4J0 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Ccdc60Q8C4J0 Gm23634-201ENSMUST00000175071 91 ntBASIC21.24■□□□□ 0.99
Ccdc60Q8C4J0 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc60Q8C4J0 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc60Q8C4J0 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc60Q8C4J0 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc60Q8C4J0 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc60Q8C4J0 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc60Q8C4J0 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc60Q8C4J0 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc60Q8C4J0 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc60Q8C4J0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc60Q8C4J0 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc60Q8C4J0 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC21.24■□□□□ 0.99
Ccdc60Q8C4J0 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc60Q8C4J0 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Ccdc60Q8C4J0 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc60Q8C4J0 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC21.23■□□□□ 0.99
Ccdc60Q8C4J0 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc60Q8C4J0 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc60Q8C4J0 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc60Q8C4J0 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc60Q8C4J0 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc60Q8C4J0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc60Q8C4J0 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Ccdc60Q8C4J0 Zfp264-201ENSMUST00000208656 1563 ntBASIC21.23■□□□□ 0.99
Ccdc60Q8C4J0 Gm45774-201ENSMUST00000211992 2665 ntBASIC21.22■□□□□ 0.99
Ccdc60Q8C4J0 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc60Q8C4J0 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc60Q8C4J0 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc60Q8C4J0 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc60Q8C4J0 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc60Q8C4J0 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms