Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp44Q8C2S0 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp44Q8C2S0 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp44Q8C2S0 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.53■□□□□ 0.72
Usp44Q8C2S0 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp44Q8C2S0 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Usp44Q8C2S0 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp44Q8C2S0 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp44Q8C2S0 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.52■□□□□ 0.72
Usp44Q8C2S0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
Usp44Q8C2S0 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp44Q8C2S0 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Usp44Q8C2S0 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Usp44Q8C2S0 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp44Q8C2S0 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp44Q8C2S0 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.52■□□□□ 0.72
Usp44Q8C2S0 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp44Q8C2S0 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.52■□□□□ 0.72
Usp44Q8C2S0 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Usp44Q8C2S0 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Usp44Q8C2S0 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Usp44Q8C2S0 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp44Q8C2S0 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Usp44Q8C2S0 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.51■□□□□ 0.71
Usp44Q8C2S0 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp44Q8C2S0 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp44Q8C2S0 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp44Q8C2S0 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Usp44Q8C2S0 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Usp44Q8C2S0 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Usp44Q8C2S0 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.51■□□□□ 0.71
Usp44Q8C2S0 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.51■□□□□ 0.71
Usp44Q8C2S0 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Usp44Q8C2S0 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.51■□□□□ 0.71
Usp44Q8C2S0 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Usp44Q8C2S0 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Usp44Q8C2S0 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp44Q8C2S0 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Usp44Q8C2S0 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Usp44Q8C2S0 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Usp44Q8C2S0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp44Q8C2S0 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp44Q8C2S0 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp44Q8C2S0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Usp44Q8C2S0 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp44Q8C2S0 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Usp44Q8C2S0 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp44Q8C2S0 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp44Q8C2S0 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.5■□□□□ 0.71
Usp44Q8C2S0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.5■□□□□ 0.71
Usp44Q8C2S0 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Usp44Q8C2S0 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp44Q8C2S0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp44Q8C2S0 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Usp44Q8C2S0 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp44Q8C2S0 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Usp44Q8C2S0 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Usp44Q8C2S0 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp44Q8C2S0 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp44Q8C2S0 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Usp44Q8C2S0 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.49■□□□□ 0.71
Usp44Q8C2S0 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp44Q8C2S0 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Usp44Q8C2S0 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.49■□□□□ 0.71
Usp44Q8C2S0 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Usp44Q8C2S0 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp44Q8C2S0 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.49■□□□□ 0.71
Usp44Q8C2S0 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Usp44Q8C2S0 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp44Q8C2S0 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp44Q8C2S0 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp44Q8C2S0 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp44Q8C2S0 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.49■□□□□ 0.71
Usp44Q8C2S0 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp44Q8C2S0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp44Q8C2S0 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Usp44Q8C2S0 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp44Q8C2S0 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp44Q8C2S0 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp44Q8C2S0 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp44Q8C2S0 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp44Q8C2S0 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.48■□□□□ 0.71
Usp44Q8C2S0 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp44Q8C2S0 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Usp44Q8C2S0 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Usp44Q8C2S0 Gm9013-201ENSMUST00000132939 882 ntBASIC19.48■□□□□ 0.71
Usp44Q8C2S0 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp44Q8C2S0 Gm5587-201ENSMUST00000206270 674 ntBASIC19.48■□□□□ 0.71
Usp44Q8C2S0 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp44Q8C2S0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Usp44Q8C2S0 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp44Q8C2S0 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Usp44Q8C2S0 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Usp44Q8C2S0 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.48■□□□□ 0.71
Usp44Q8C2S0 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp44Q8C2S0 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp44Q8C2S0 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp44Q8C2S0 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp44Q8C2S0 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Usp44Q8C2S0 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms