Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sh3rf2Q8BZT2 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.88■□□□□ 0.29
Sh3rf2Q8BZT2 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.88■□□□□ 0.29
Sh3rf2Q8BZT2 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sh3rf2Q8BZT2 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.88■□□□□ 0.29
Sh3rf2Q8BZT2 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Sh3rf2Q8BZT2 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Sh3rf2Q8BZT2 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sh3rf2Q8BZT2 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sh3rf2Q8BZT2 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.88■□□□□ 0.29
Sh3rf2Q8BZT2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sh3rf2Q8BZT2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sh3rf2Q8BZT2 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sh3rf2Q8BZT2 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Sh3rf2Q8BZT2 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sh3rf2Q8BZT2 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.87■□□□□ 0.29
Sh3rf2Q8BZT2 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sh3rf2Q8BZT2 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sh3rf2Q8BZT2 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sh3rf2Q8BZT2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sh3rf2Q8BZT2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sh3rf2Q8BZT2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sh3rf2Q8BZT2 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sh3rf2Q8BZT2 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Sh3rf2Q8BZT2 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Sh3rf2Q8BZT2 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sh3rf2Q8BZT2 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.87■□□□□ 0.29
Sh3rf2Q8BZT2 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.87■□□□□ 0.29
Sh3rf2Q8BZT2 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sh3rf2Q8BZT2 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Sh3rf2Q8BZT2 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sh3rf2Q8BZT2 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sh3rf2Q8BZT2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sh3rf2Q8BZT2 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sh3rf2Q8BZT2 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sh3rf2Q8BZT2 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sh3rf2Q8BZT2 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sh3rf2Q8BZT2 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sh3rf2Q8BZT2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.87■□□□□ 0.29
Sh3rf2Q8BZT2 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sh3rf2Q8BZT2 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sh3rf2Q8BZT2 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.87■□□□□ 0.29
Sh3rf2Q8BZT2 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.87■□□□□ 0.29
Sh3rf2Q8BZT2 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sh3rf2Q8BZT2 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sh3rf2Q8BZT2 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sh3rf2Q8BZT2 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sh3rf2Q8BZT2 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.86■□□□□ 0.29
Sh3rf2Q8BZT2 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sh3rf2Q8BZT2 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sh3rf2Q8BZT2 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
Sh3rf2Q8BZT2 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sh3rf2Q8BZT2 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.86■□□□□ 0.29
Sh3rf2Q8BZT2 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.86■□□□□ 0.29
Sh3rf2Q8BZT2 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sh3rf2Q8BZT2 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Sh3rf2Q8BZT2 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sh3rf2Q8BZT2 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sh3rf2Q8BZT2 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.86■□□□□ 0.29
Sh3rf2Q8BZT2 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.86■□□□□ 0.29
Sh3rf2Q8BZT2 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Sh3rf2Q8BZT2 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Sh3rf2Q8BZT2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sh3rf2Q8BZT2 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sh3rf2Q8BZT2 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Sh3rf2Q8BZT2 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Sh3rf2Q8BZT2 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sh3rf2Q8BZT2 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3rf2Q8BZT2 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3rf2Q8BZT2 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Sh3rf2Q8BZT2 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3rf2Q8BZT2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3rf2Q8BZT2 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Sh3rf2Q8BZT2 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3rf2Q8BZT2 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3rf2Q8BZT2 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.85■□□□□ 0.29
Sh3rf2Q8BZT2 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3rf2Q8BZT2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3rf2Q8BZT2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3rf2Q8BZT2 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.85■□□□□ 0.29
Sh3rf2Q8BZT2 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.85■□□□□ 0.29
Sh3rf2Q8BZT2 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.85■□□□□ 0.29
Sh3rf2Q8BZT2 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
Sh3rf2Q8BZT2 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
Sh3rf2Q8BZT2 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
Sh3rf2Q8BZT2 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3rf2Q8BZT2 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.85■□□□□ 0.29
Sh3rf2Q8BZT2 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3rf2Q8BZT2 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3rf2Q8BZT2 Birc2-201ENSMUST00000054878 378 ntBASIC16.85■□□□□ 0.29
Sh3rf2Q8BZT2 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3rf2Q8BZT2 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3rf2Q8BZT2 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3rf2Q8BZT2 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3rf2Q8BZT2 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3rf2Q8BZT2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3rf2Q8BZT2 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Sh3rf2Q8BZT2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3rf2Q8BZT2 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.84■□□□□ 0.29
Sh3rf2Q8BZT2 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms