Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chd9Q8BYH8 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Chd9Q8BYH8 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chd9Q8BYH8 Mir3547-201ENSMUST00000175461 88 ntBASIC13.12□□□□□ -0.31
Chd9Q8BYH8 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.12□□□□□ -0.31
Chd9Q8BYH8 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chd9Q8BYH8 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Chd9Q8BYH8 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Chd9Q8BYH8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chd9Q8BYH8 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.12□□□□□ -0.31
Chd9Q8BYH8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chd9Q8BYH8 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Chd9Q8BYH8 Gm43213-201ENSMUST00000151866 1790 ntBASIC13.12□□□□□ -0.31
Chd9Q8BYH8 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chd9Q8BYH8 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chd9Q8BYH8 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Chd9Q8BYH8 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.12□□□□□ -0.31
Chd9Q8BYH8 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.12□□□□□ -0.31
Chd9Q8BYH8 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.12□□□□□ -0.31
Chd9Q8BYH8 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chd9Q8BYH8 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Chd9Q8BYH8 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC13.12□□□□□ -0.31
Chd9Q8BYH8 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chd9Q8BYH8 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chd9Q8BYH8 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chd9Q8BYH8 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chd9Q8BYH8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chd9Q8BYH8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Chd9Q8BYH8 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.11□□□□□ -0.31
Chd9Q8BYH8 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chd9Q8BYH8 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.11□□□□□ -0.31
Chd9Q8BYH8 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Chd9Q8BYH8 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Chd9Q8BYH8 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chd9Q8BYH8 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Chd9Q8BYH8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chd9Q8BYH8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chd9Q8BYH8 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chd9Q8BYH8 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chd9Q8BYH8 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chd9Q8BYH8 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.11□□□□□ -0.31
Chd9Q8BYH8 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chd9Q8BYH8 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.11□□□□□ -0.31
Chd9Q8BYH8 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chd9Q8BYH8 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.11□□□□□ -0.31
Chd9Q8BYH8 Gm7653-201ENSMUST00000214567 508 ntBASIC13.11□□□□□ -0.31
Chd9Q8BYH8 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chd9Q8BYH8 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Chd9Q8BYH8 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chd9Q8BYH8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chd9Q8BYH8 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chd9Q8BYH8 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chd9Q8BYH8 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chd9Q8BYH8 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chd9Q8BYH8 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chd9Q8BYH8 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chd9Q8BYH8 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC13.11□□□□□ -0.31
Chd9Q8BYH8 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd9Q8BYH8 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chd9Q8BYH8 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.1□□□□□ -0.31
Chd9Q8BYH8 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd9Q8BYH8 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd9Q8BYH8 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd9Q8BYH8 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Chd9Q8BYH8 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd9Q8BYH8 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd9Q8BYH8 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd9Q8BYH8 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd9Q8BYH8 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd9Q8BYH8 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Chd9Q8BYH8 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chd9Q8BYH8 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd9Q8BYH8 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chd9Q8BYH8 Gm9899-201ENSMUST00000065519 555 ntBASIC13.1□□□□□ -0.31
Chd9Q8BYH8 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Chd9Q8BYH8 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd9Q8BYH8 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd9Q8BYH8 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd9Q8BYH8 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Chd9Q8BYH8 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.1□□□□□ -0.31
Chd9Q8BYH8 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd9Q8BYH8 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd9Q8BYH8 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chd9Q8BYH8 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd9Q8BYH8 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Chd9Q8BYH8 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Chd9Q8BYH8 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Chd9Q8BYH8 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd9Q8BYH8 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd9Q8BYH8 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd9Q8BYH8 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd9Q8BYH8 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd9Q8BYH8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd9Q8BYH8 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd9Q8BYH8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd9Q8BYH8 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd9Q8BYH8 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd9Q8BYH8 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Chd9Q8BYH8 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd9Q8BYH8 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms