Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trerf1Q8BXJ2 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trerf1Q8BXJ2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trerf1Q8BXJ2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Trerf1Q8BXJ2 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trerf1Q8BXJ2 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trerf1Q8BXJ2 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trerf1Q8BXJ2 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.58■□□□□ 0.4
Trerf1Q8BXJ2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trerf1Q8BXJ2 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trerf1Q8BXJ2 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trerf1Q8BXJ2 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.58■□□□□ 0.4
Trerf1Q8BXJ2 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trerf1Q8BXJ2 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trerf1Q8BXJ2 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.58■□□□□ 0.4
Trerf1Q8BXJ2 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.58■□□□□ 0.4
Trerf1Q8BXJ2 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trerf1Q8BXJ2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trerf1Q8BXJ2 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.58■□□□□ 0.4
Trerf1Q8BXJ2 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trerf1Q8BXJ2 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trerf1Q8BXJ2 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trerf1Q8BXJ2 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Trerf1Q8BXJ2 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trerf1Q8BXJ2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trerf1Q8BXJ2 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trerf1Q8BXJ2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trerf1Q8BXJ2 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Trerf1Q8BXJ2 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.57■□□□□ 0.4
Trerf1Q8BXJ2 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Trerf1Q8BXJ2 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Trerf1Q8BXJ2 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trerf1Q8BXJ2 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trerf1Q8BXJ2 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trerf1Q8BXJ2 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trerf1Q8BXJ2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trerf1Q8BXJ2 Gm10710-201ENSMUST00000047876 3971 ntBASIC17.57■□□□□ 0.4
Trerf1Q8BXJ2 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trerf1Q8BXJ2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trerf1Q8BXJ2 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trerf1Q8BXJ2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trerf1Q8BXJ2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trerf1Q8BXJ2 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trerf1Q8BXJ2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trerf1Q8BXJ2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.56■□□□□ 0.4
Trerf1Q8BXJ2 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trerf1Q8BXJ2 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trerf1Q8BXJ2 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trerf1Q8BXJ2 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.56■□□□□ 0.4
Trerf1Q8BXJ2 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trerf1Q8BXJ2 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trerf1Q8BXJ2 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trerf1Q8BXJ2 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trerf1Q8BXJ2 Gm43799-201ENSMUST00000201845 579 ntBASIC17.56■□□□□ 0.4
Trerf1Q8BXJ2 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trerf1Q8BXJ2 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trerf1Q8BXJ2 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trerf1Q8BXJ2 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trerf1Q8BXJ2 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trerf1Q8BXJ2 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trerf1Q8BXJ2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trerf1Q8BXJ2 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trerf1Q8BXJ2 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trerf1Q8BXJ2 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trerf1Q8BXJ2 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trerf1Q8BXJ2 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trerf1Q8BXJ2 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trerf1Q8BXJ2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trerf1Q8BXJ2 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trerf1Q8BXJ2 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trerf1Q8BXJ2 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trerf1Q8BXJ2 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trerf1Q8BXJ2 Gm13836-201ENSMUST00000121159 501 ntBASIC17.55■□□□□ 0.4
Trerf1Q8BXJ2 Gm7638-201ENSMUST00000121348 967 ntBASIC17.55■□□□□ 0.4
Trerf1Q8BXJ2 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trerf1Q8BXJ2 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.55■□□□□ 0.4
Trerf1Q8BXJ2 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trerf1Q8BXJ2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trerf1Q8BXJ2 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Trerf1Q8BXJ2 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trerf1Q8BXJ2 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trerf1Q8BXJ2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trerf1Q8BXJ2 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trerf1Q8BXJ2 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trerf1Q8BXJ2 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trerf1Q8BXJ2 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trerf1Q8BXJ2 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trerf1Q8BXJ2 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trerf1Q8BXJ2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trerf1Q8BXJ2 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trerf1Q8BXJ2 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Trerf1Q8BXJ2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trerf1Q8BXJ2 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trerf1Q8BXJ2 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trerf1Q8BXJ2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trerf1Q8BXJ2 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.54■□□□□ 0.4
Trerf1Q8BXJ2 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trerf1Q8BXJ2 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trerf1Q8BXJ2 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trerf1Q8BXJ2 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms