Protein–RNA interactions for Protein: Q8BLA8

Trpa1, Transient receptor potential cation channel subfamily A member 1, mousemouse

Predictions only

Length 1,125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpa1Q8BLA8 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trpa1Q8BLA8 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trpa1Q8BLA8 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trpa1Q8BLA8 Gm16061-201ENSMUST00000122167 857 ntBASIC17.54■□□□□ 0.4
Trpa1Q8BLA8 Gm18958-201ENSMUST00000174258 762 ntBASIC17.54■□□□□ 0.4
Trpa1Q8BLA8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.54■□□□□ 0.4
Trpa1Q8BLA8 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trpa1Q8BLA8 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Trpa1Q8BLA8 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trpa1Q8BLA8 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.54■□□□□ 0.4
Trpa1Q8BLA8 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trpa1Q8BLA8 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trpa1Q8BLA8 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Trpa1Q8BLA8 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trpa1Q8BLA8 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trpa1Q8BLA8 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trpa1Q8BLA8 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trpa1Q8BLA8 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trpa1Q8BLA8 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Trpa1Q8BLA8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.53■□□□□ 0.4
Trpa1Q8BLA8 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trpa1Q8BLA8 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Trpa1Q8BLA8 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trpa1Q8BLA8 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trpa1Q8BLA8 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trpa1Q8BLA8 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trpa1Q8BLA8 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Trpa1Q8BLA8 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trpa1Q8BLA8 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trpa1Q8BLA8 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trpa1Q8BLA8 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Trpa1Q8BLA8 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Trpa1Q8BLA8 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trpa1Q8BLA8 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trpa1Q8BLA8 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Trpa1Q8BLA8 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.52■□□□□ 0.4
Trpa1Q8BLA8 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trpa1Q8BLA8 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trpa1Q8BLA8 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trpa1Q8BLA8 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trpa1Q8BLA8 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Trpa1Q8BLA8 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trpa1Q8BLA8 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trpa1Q8BLA8 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Trpa1Q8BLA8 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Trpa1Q8BLA8 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trpa1Q8BLA8 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trpa1Q8BLA8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Trpa1Q8BLA8 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trpa1Q8BLA8 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trpa1Q8BLA8 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trpa1Q8BLA8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.51■□□□□ 0.39
Trpa1Q8BLA8 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trpa1Q8BLA8 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trpa1Q8BLA8 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trpa1Q8BLA8 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trpa1Q8BLA8 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
Trpa1Q8BLA8 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trpa1Q8BLA8 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trpa1Q8BLA8 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trpa1Q8BLA8 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trpa1Q8BLA8 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trpa1Q8BLA8 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trpa1Q8BLA8 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trpa1Q8BLA8 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trpa1Q8BLA8 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Trpa1Q8BLA8 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trpa1Q8BLA8 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trpa1Q8BLA8 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.5■□□□□ 0.39
Trpa1Q8BLA8 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trpa1Q8BLA8 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trpa1Q8BLA8 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trpa1Q8BLA8 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.5■□□□□ 0.39
Trpa1Q8BLA8 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trpa1Q8BLA8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.5■□□□□ 0.39
Trpa1Q8BLA8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trpa1Q8BLA8 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trpa1Q8BLA8 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trpa1Q8BLA8 Gm27000-201ENSMUST00000182943 842 ntBASIC17.5■□□□□ 0.39
Trpa1Q8BLA8 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.5■□□□□ 0.39
Trpa1Q8BLA8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trpa1Q8BLA8 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trpa1Q8BLA8 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trpa1Q8BLA8 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trpa1Q8BLA8 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trpa1Q8BLA8 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trpa1Q8BLA8 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trpa1Q8BLA8 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trpa1Q8BLA8 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Trpa1Q8BLA8 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trpa1Q8BLA8 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trpa1Q8BLA8 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trpa1Q8BLA8 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trpa1Q8BLA8 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.49■□□□□ 0.39
Trpa1Q8BLA8 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.49■□□□□ 0.39
Trpa1Q8BLA8 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.49■□□□□ 0.39
Trpa1Q8BLA8 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trpa1Q8BLA8 Gm18032-201ENSMUST00000222541 538 ntBASIC17.49■□□□□ 0.39
Trpa1Q8BLA8 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trpa1Q8BLA8 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms