Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smg1Q8BKX6 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smg1Q8BKX6 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smg1Q8BKX6 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smg1Q8BKX6 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smg1Q8BKX6 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smg1Q8BKX6 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Smg1Q8BKX6 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.09□□□□□ -0.15
Smg1Q8BKX6 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.09□□□□□ -0.15
Smg1Q8BKX6 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smg1Q8BKX6 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.09□□□□□ -0.15
Smg1Q8BKX6 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smg1Q8BKX6 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smg1Q8BKX6 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.09□□□□□ -0.15
Smg1Q8BKX6 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smg1Q8BKX6 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smg1Q8BKX6 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smg1Q8BKX6 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smg1Q8BKX6 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smg1Q8BKX6 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smg1Q8BKX6 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Smg1Q8BKX6 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Smg1Q8BKX6 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smg1Q8BKX6 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smg1Q8BKX6 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.08□□□□□ -0.16
Smg1Q8BKX6 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smg1Q8BKX6 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smg1Q8BKX6 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.08□□□□□ -0.16
Smg1Q8BKX6 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.08□□□□□ -0.16
Smg1Q8BKX6 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smg1Q8BKX6 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smg1Q8BKX6 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Smg1Q8BKX6 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smg1Q8BKX6 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smg1Q8BKX6 Gm4535-201ENSMUST00000182274 558 ntBASIC14.08□□□□□ -0.16
Smg1Q8BKX6 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smg1Q8BKX6 Gm10355-201ENSMUST00000097146 517 ntBASIC14.08□□□□□ -0.16
Smg1Q8BKX6 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smg1Q8BKX6 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.08□□□□□ -0.16
Smg1Q8BKX6 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smg1Q8BKX6 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smg1Q8BKX6 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.08□□□□□ -0.16
Smg1Q8BKX6 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smg1Q8BKX6 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.08□□□□□ -0.16
Smg1Q8BKX6 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.08□□□□□ -0.16
Smg1Q8BKX6 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.08□□□□□ -0.16
Smg1Q8BKX6 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smg1Q8BKX6 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smg1Q8BKX6 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smg1Q8BKX6 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.07□□□□□ -0.16
Smg1Q8BKX6 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.07□□□□□ -0.16
Smg1Q8BKX6 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smg1Q8BKX6 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Smg1Q8BKX6 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.07□□□□□ -0.16
Smg1Q8BKX6 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smg1Q8BKX6 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smg1Q8BKX6 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Smg1Q8BKX6 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smg1Q8BKX6 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.07□□□□□ -0.16
Smg1Q8BKX6 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.07□□□□□ -0.16
Smg1Q8BKX6 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smg1Q8BKX6 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.07□□□□□ -0.16
Smg1Q8BKX6 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smg1Q8BKX6 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smg1Q8BKX6 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Smg1Q8BKX6 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smg1Q8BKX6 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smg1Q8BKX6 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smg1Q8BKX6 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smg1Q8BKX6 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smg1Q8BKX6 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Smg1Q8BKX6 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smg1Q8BKX6 Mir8117-201ENSMUST00000184773 107 ntBASIC14.06□□□□□ -0.16
Smg1Q8BKX6 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Smg1Q8BKX6 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smg1Q8BKX6 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smg1Q8BKX6 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Smg1Q8BKX6 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smg1Q8BKX6 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Smg1Q8BKX6 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.06□□□□□ -0.16
Smg1Q8BKX6 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smg1Q8BKX6 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Smg1Q8BKX6 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smg1Q8BKX6 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smg1Q8BKX6 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Smg1Q8BKX6 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Smg1Q8BKX6 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.06□□□□□ -0.16
Smg1Q8BKX6 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Smg1Q8BKX6 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smg1Q8BKX6 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smg1Q8BKX6 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smg1Q8BKX6 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smg1Q8BKX6 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.05□□□□□ -0.16
Smg1Q8BKX6 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.05□□□□□ -0.16
Smg1Q8BKX6 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smg1Q8BKX6 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.05□□□□□ -0.16
Smg1Q8BKX6 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC14.05□□□□□ -0.16
Smg1Q8BKX6 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.05□□□□□ -0.16
Smg1Q8BKX6 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smg1Q8BKX6 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms