Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2bQ8BJF9 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2bQ8BJF9 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2bQ8BJF9 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Chmp2bQ8BJF9 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2bQ8BJF9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2bQ8BJF9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp2bQ8BJF9 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp2bQ8BJF9 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp2bQ8BJF9 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp2bQ8BJF9 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp2bQ8BJF9 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.1■□□□□ 0.33
Chmp2bQ8BJF9 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp2bQ8BJF9 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp2bQ8BJF9 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp2bQ8BJF9 Gm37025-201ENSMUST00000195159 829 ntBASIC17.1■□□□□ 0.33
Chmp2bQ8BJF9 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.1■□□□□ 0.33
Chmp2bQ8BJF9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.1■□□□□ 0.33
Chmp2bQ8BJF9 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.1■□□□□ 0.33
Chmp2bQ8BJF9 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp2bQ8BJF9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.1■□□□□ 0.33
Chmp2bQ8BJF9 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp2bQ8BJF9 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp2bQ8BJF9 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp2bQ8BJF9 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Chmp2bQ8BJF9 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.1■□□□□ 0.33
Chmp2bQ8BJF9 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Chmp2bQ8BJF9 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp2bQ8BJF9 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp2bQ8BJF9 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.09■□□□□ 0.33
Chmp2bQ8BJF9 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp2bQ8BJF9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Chmp2bQ8BJF9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Chmp2bQ8BJF9 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.09■□□□□ 0.33
Chmp2bQ8BJF9 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp2bQ8BJF9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp2bQ8BJF9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.09■□□□□ 0.33
Chmp2bQ8BJF9 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp2bQ8BJF9 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp2bQ8BJF9 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp2bQ8BJF9 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp2bQ8BJF9 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Chmp2bQ8BJF9 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp2bQ8BJF9 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp2bQ8BJF9 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp2bQ8BJF9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chmp2bQ8BJF9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chmp2bQ8BJF9 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chmp2bQ8BJF9 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chmp2bQ8BJF9 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chmp2bQ8BJF9 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chmp2bQ8BJF9 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.08■□□□□ 0.33
Chmp2bQ8BJF9 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chmp2bQ8BJF9 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chmp2bQ8BJF9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Chmp2bQ8BJF9 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chmp2bQ8BJF9 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp2bQ8BJF9 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp2bQ8BJF9 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
Chmp2bQ8BJF9 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp2bQ8BJF9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp2bQ8BJF9 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.08■□□□□ 0.32
Chmp2bQ8BJF9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp2bQ8BJF9 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp2bQ8BJF9 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Chmp2bQ8BJF9 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp2bQ8BJF9 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp2bQ8BJF9 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.08■□□□□ 0.32
Chmp2bQ8BJF9 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp2bQ8BJF9 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp2bQ8BJF9 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Chmp2bQ8BJF9 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp2bQ8BJF9 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp2bQ8BJF9 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp2bQ8BJF9 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp2bQ8BJF9 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp2bQ8BJF9 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Chmp2bQ8BJF9 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.07■□□□□ 0.32
Chmp2bQ8BJF9 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.07■□□□□ 0.32
Chmp2bQ8BJF9 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.07■□□□□ 0.32
Chmp2bQ8BJF9 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp2bQ8BJF9 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp2bQ8BJF9 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp2bQ8BJF9 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp2bQ8BJF9 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp2bQ8BJF9 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp2bQ8BJF9 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp2bQ8BJF9 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp2bQ8BJF9 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.07■□□□□ 0.32
Chmp2bQ8BJF9 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.07■□□□□ 0.32
Chmp2bQ8BJF9 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp2bQ8BJF9 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp2bQ8BJF9 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp2bQ8BJF9 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp2bQ8BJF9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Chmp2bQ8BJF9 Gm10698-201ENSMUST00000182663 604 ntBASIC17.06■□□□□ 0.32
Chmp2bQ8BJF9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp2bQ8BJF9 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.06■□□□□ 0.32
Chmp2bQ8BJF9 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp2bQ8BJF9 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms