Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh20Q8BIZ0 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pcdh20Q8BIZ0 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh20Q8BIZ0 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh20Q8BIZ0 Gm13401-201ENSMUST00000117074 291 ntBASIC16.3■□□□□ 0.2
Pcdh20Q8BIZ0 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.3■□□□□ 0.2
Pcdh20Q8BIZ0 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.3■□□□□ 0.2
Pcdh20Q8BIZ0 Gm30025-201ENSMUST00000218555 728 ntBASIC16.3■□□□□ 0.2
Pcdh20Q8BIZ0 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh20Q8BIZ0 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh20Q8BIZ0 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh20Q8BIZ0 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh20Q8BIZ0 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh20Q8BIZ0 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh20Q8BIZ0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh20Q8BIZ0 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh20Q8BIZ0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh20Q8BIZ0 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.3■□□□□ 0.2
Pcdh20Q8BIZ0 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh20Q8BIZ0 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh20Q8BIZ0 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh20Q8BIZ0 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh20Q8BIZ0 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh20Q8BIZ0 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh20Q8BIZ0 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Pcdh20Q8BIZ0 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh20Q8BIZ0 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh20Q8BIZ0 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh20Q8BIZ0 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh20Q8BIZ0 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Pcdh20Q8BIZ0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.29■□□□□ 0.2
Pcdh20Q8BIZ0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.29■□□□□ 0.2
Pcdh20Q8BIZ0 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh20Q8BIZ0 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.29■□□□□ 0.2
Pcdh20Q8BIZ0 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.29■□□□□ 0.2
Pcdh20Q8BIZ0 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh20Q8BIZ0 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh20Q8BIZ0 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh20Q8BIZ0 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh20Q8BIZ0 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh20Q8BIZ0 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh20Q8BIZ0 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pcdh20Q8BIZ0 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Pcdh20Q8BIZ0 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh20Q8BIZ0 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Pcdh20Q8BIZ0 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.29■□□□□ 0.2
Pcdh20Q8BIZ0 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh20Q8BIZ0 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.28■□□□□ 0.2
Pcdh20Q8BIZ0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh20Q8BIZ0 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh20Q8BIZ0 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh20Q8BIZ0 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh20Q8BIZ0 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh20Q8BIZ0 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh20Q8BIZ0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh20Q8BIZ0 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh20Q8BIZ0 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh20Q8BIZ0 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh20Q8BIZ0 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh20Q8BIZ0 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh20Q8BIZ0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh20Q8BIZ0 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh20Q8BIZ0 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh20Q8BIZ0 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh20Q8BIZ0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh20Q8BIZ0 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh20Q8BIZ0 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pcdh20Q8BIZ0 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh20Q8BIZ0 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh20Q8BIZ0 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh20Q8BIZ0 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh20Q8BIZ0 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh20Q8BIZ0 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh20Q8BIZ0 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Pcdh20Q8BIZ0 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh20Q8BIZ0 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh20Q8BIZ0 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh20Q8BIZ0 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.27■□□□□ 0.2
Pcdh20Q8BIZ0 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh20Q8BIZ0 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh20Q8BIZ0 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh20Q8BIZ0 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh20Q8BIZ0 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh20Q8BIZ0 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh20Q8BIZ0 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh20Q8BIZ0 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Pcdh20Q8BIZ0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.27■□□□□ 0.2
Pcdh20Q8BIZ0 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh20Q8BIZ0 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Pcdh20Q8BIZ0 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh20Q8BIZ0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh20Q8BIZ0 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.27■□□□□ 0.2
Pcdh20Q8BIZ0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.27■□□□□ 0.2
Pcdh20Q8BIZ0 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdh20Q8BIZ0 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
Pcdh20Q8BIZ0 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.27■□□□□ 0.19
Pcdh20Q8BIZ0 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdh20Q8BIZ0 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdh20Q8BIZ0 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdh20Q8BIZ0 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms