Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Ccdc40Q8BI79 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Ccdc40Q8BI79 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc40Q8BI79 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.39■□□□□ 0.37
Ccdc40Q8BI79 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc40Q8BI79 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Ccdc40Q8BI79 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc40Q8BI79 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc40Q8BI79 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc40Q8BI79 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc40Q8BI79 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc40Q8BI79 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.39■□□□□ 0.37
Ccdc40Q8BI79 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc40Q8BI79 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc40Q8BI79 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc40Q8BI79 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc40Q8BI79 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc40Q8BI79 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc40Q8BI79 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.38■□□□□ 0.37
Ccdc40Q8BI79 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc40Q8BI79 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.38■□□□□ 0.37
Ccdc40Q8BI79 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.38■□□□□ 0.37
Ccdc40Q8BI79 Gm7638-201ENSMUST00000121348 967 ntBASIC17.38■□□□□ 0.37
Ccdc40Q8BI79 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.38■□□□□ 0.37
Ccdc40Q8BI79 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.38■□□□□ 0.37
Ccdc40Q8BI79 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc40Q8BI79 Il3ra-202ENSMUST00000223589 738 ntBASIC17.38■□□□□ 0.37
Ccdc40Q8BI79 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc40Q8BI79 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc40Q8BI79 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc40Q8BI79 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc40Q8BI79 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc40Q8BI79 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc40Q8BI79 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc40Q8BI79 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc40Q8BI79 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc40Q8BI79 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc40Q8BI79 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Ccdc40Q8BI79 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Ccdc40Q8BI79 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc40Q8BI79 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc40Q8BI79 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc40Q8BI79 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Ccdc40Q8BI79 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc40Q8BI79 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc40Q8BI79 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc40Q8BI79 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Ccdc40Q8BI79 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc40Q8BI79 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Ccdc40Q8BI79 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.37■□□□□ 0.37
Ccdc40Q8BI79 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc40Q8BI79 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc40Q8BI79 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.37■□□□□ 0.37
Ccdc40Q8BI79 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc40Q8BI79 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.37■□□□□ 0.37
Ccdc40Q8BI79 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.37■□□□□ 0.37
Ccdc40Q8BI79 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc40Q8BI79 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc40Q8BI79 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc40Q8BI79 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc40Q8BI79 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc40Q8BI79 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc40Q8BI79 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc40Q8BI79 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc40Q8BI79 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc40Q8BI79 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.36■□□□□ 0.37
Ccdc40Q8BI79 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc40Q8BI79 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc40Q8BI79 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ccdc40Q8BI79 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc40Q8BI79 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc40Q8BI79 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc40Q8BI79 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.36■□□□□ 0.37
Ccdc40Q8BI79 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.36■□□□□ 0.37
Ccdc40Q8BI79 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Ccdc40Q8BI79 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.36■□□□□ 0.37
Ccdc40Q8BI79 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.36■□□□□ 0.37
Ccdc40Q8BI79 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Ccdc40Q8BI79 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc40Q8BI79 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Ccdc40Q8BI79 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc40Q8BI79 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Ccdc40Q8BI79 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.36■□□□□ 0.37
Ccdc40Q8BI79 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc40Q8BI79 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.36■□□□□ 0.37
Ccdc40Q8BI79 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc40Q8BI79 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc40Q8BI79 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc40Q8BI79 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Ccdc40Q8BI79 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc40Q8BI79 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc40Q8BI79 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc40Q8BI79 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc40Q8BI79 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc40Q8BI79 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc40Q8BI79 Gm21814-202ENSMUST00000203277 873 ntBASIC17.35■□□□□ 0.37
Ccdc40Q8BI79 Gm3375-201ENSMUST00000203929 796 ntBASIC17.35■□□□□ 0.37
Ccdc40Q8BI79 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc40Q8BI79 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc40Q8BI79 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms