Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf38bQ80SY5 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Prpf38bQ80SY5 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf38bQ80SY5 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Prpf38bQ80SY5 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf38bQ80SY5 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Prpf38bQ80SY5 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf38bQ80SY5 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf38bQ80SY5 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.38■□□□□ 0.37
Prpf38bQ80SY5 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf38bQ80SY5 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.38■□□□□ 0.37
Prpf38bQ80SY5 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf38bQ80SY5 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf38bQ80SY5 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.38■□□□□ 0.37
Prpf38bQ80SY5 Gm29791-202ENSMUST00000207888 369 ntBASIC17.38■□□□□ 0.37
Prpf38bQ80SY5 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf38bQ80SY5 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf38bQ80SY5 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf38bQ80SY5 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf38bQ80SY5 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf38bQ80SY5 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf38bQ80SY5 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf38bQ80SY5 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.38■□□□□ 0.37
Prpf38bQ80SY5 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.38■□□□□ 0.37
Prpf38bQ80SY5 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Prpf38bQ80SY5 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf38bQ80SY5 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf38bQ80SY5 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf38bQ80SY5 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf38bQ80SY5 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf38bQ80SY5 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.37■□□□□ 0.37
Prpf38bQ80SY5 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf38bQ80SY5 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf38bQ80SY5 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf38bQ80SY5 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf38bQ80SY5 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Prpf38bQ80SY5 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf38bQ80SY5 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf38bQ80SY5 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Prpf38bQ80SY5 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf38bQ80SY5 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Prpf38bQ80SY5 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf38bQ80SY5 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.37■□□□□ 0.37
Prpf38bQ80SY5 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf38bQ80SY5 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf38bQ80SY5 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Prpf38bQ80SY5 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf38bQ80SY5 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Prpf38bQ80SY5 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf38bQ80SY5 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Prpf38bQ80SY5 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf38bQ80SY5 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf38bQ80SY5 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf38bQ80SY5 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf38bQ80SY5 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Prpf38bQ80SY5 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Prpf38bQ80SY5 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Prpf38bQ80SY5 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.36■□□□□ 0.37
Prpf38bQ80SY5 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.36■□□□□ 0.37
Prpf38bQ80SY5 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf38bQ80SY5 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf38bQ80SY5 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf38bQ80SY5 Gm8969-201ENSMUST00000199694 526 ntBASIC17.36■□□□□ 0.37
Prpf38bQ80SY5 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf38bQ80SY5 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Prpf38bQ80SY5 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf38bQ80SY5 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf38bQ80SY5 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf38bQ80SY5 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf38bQ80SY5 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf38bQ80SY5 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf38bQ80SY5 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf38bQ80SY5 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf38bQ80SY5 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf38bQ80SY5 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf38bQ80SY5 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf38bQ80SY5 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Prpf38bQ80SY5 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf38bQ80SY5 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf38bQ80SY5 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf38bQ80SY5 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf38bQ80SY5 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf38bQ80SY5 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf38bQ80SY5 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.35■□□□□ 0.37
Prpf38bQ80SY5 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Prpf38bQ80SY5 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf38bQ80SY5 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.35■□□□□ 0.37
Prpf38bQ80SY5 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf38bQ80SY5 Gm26039-201ENSMUST00000158152 144 ntBASIC17.35■□□□□ 0.37
Prpf38bQ80SY5 Gm10052-201ENSMUST00000168019 960 ntBASIC17.35■□□□□ 0.37
Prpf38bQ80SY5 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf38bQ80SY5 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf38bQ80SY5 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf38bQ80SY5 Gm7729-201ENSMUST00000050143 801 ntBASIC17.35■□□□□ 0.37
Prpf38bQ80SY5 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Prpf38bQ80SY5 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf38bQ80SY5 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf38bQ80SY5 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf38bQ80SY5 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf38bQ80SY5 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 94.7 ms