Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Rfx4Q7TNK1 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
Rfx4Q7TNK1 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rfx4Q7TNK1 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfx4Q7TNK1 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfx4Q7TNK1 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rfx4Q7TNK1 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfx4Q7TNK1 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.06■□□□□ 0.16
Rfx4Q7TNK1 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Rfx4Q7TNK1 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfx4Q7TNK1 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfx4Q7TNK1 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rfx4Q7TNK1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.06■□□□□ 0.16
Rfx4Q7TNK1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rfx4Q7TNK1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rfx4Q7TNK1 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.06■□□□□ 0.16
Rfx4Q7TNK1 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfx4Q7TNK1 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.06■□□□□ 0.16
Rfx4Q7TNK1 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Rfx4Q7TNK1 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfx4Q7TNK1 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfx4Q7TNK1 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfx4Q7TNK1 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfx4Q7TNK1 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rfx4Q7TNK1 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Rfx4Q7TNK1 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Rfx4Q7TNK1 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rfx4Q7TNK1 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfx4Q7TNK1 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfx4Q7TNK1 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfx4Q7TNK1 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfx4Q7TNK1 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Rfx4Q7TNK1 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfx4Q7TNK1 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rfx4Q7TNK1 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.05■□□□□ 0.16
Rfx4Q7TNK1 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.05■□□□□ 0.16
Rfx4Q7TNK1 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfx4Q7TNK1 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfx4Q7TNK1 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfx4Q7TNK1 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfx4Q7TNK1 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Rfx4Q7TNK1 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Rfx4Q7TNK1 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfx4Q7TNK1 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfx4Q7TNK1 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfx4Q7TNK1 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Rfx4Q7TNK1 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rfx4Q7TNK1 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rfx4Q7TNK1 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfx4Q7TNK1 Mtag2-201ENSMUST00000058665 714 ntBASIC16.05■□□□□ 0.16
Rfx4Q7TNK1 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfx4Q7TNK1 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfx4Q7TNK1 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.05■□□□□ 0.16
Rfx4Q7TNK1 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfx4Q7TNK1 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfx4Q7TNK1 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfx4Q7TNK1 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfx4Q7TNK1 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Rfx4Q7TNK1 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.04■□□□□ 0.16
Rfx4Q7TNK1 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Rfx4Q7TNK1 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rfx4Q7TNK1 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rfx4Q7TNK1 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rfx4Q7TNK1 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rfx4Q7TNK1 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
Rfx4Q7TNK1 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.04■□□□□ 0.16
Rfx4Q7TNK1 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rfx4Q7TNK1 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Rfx4Q7TNK1 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rfx4Q7TNK1 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Rfx4Q7TNK1 Gm15375-201ENSMUST00000119510 849 ntBASIC16.04■□□□□ 0.16
Rfx4Q7TNK1 Gm26524-201ENSMUST00000192339 390 ntBASIC16.04■□□□□ 0.16
Rfx4Q7TNK1 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rfx4Q7TNK1 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rfx4Q7TNK1 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rfx4Q7TNK1 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Rfx4Q7TNK1 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.04■□□□□ 0.16
Rfx4Q7TNK1 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rfx4Q7TNK1 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rfx4Q7TNK1 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rfx4Q7TNK1 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rfx4Q7TNK1 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rfx4Q7TNK1 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rfx4Q7TNK1 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rfx4Q7TNK1 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rfx4Q7TNK1 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Rfx4Q7TNK1 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rfx4Q7TNK1 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Rfx4Q7TNK1 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rfx4Q7TNK1 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Rfx4Q7TNK1 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
Rfx4Q7TNK1 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rfx4Q7TNK1 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rfx4Q7TNK1 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.03■□□□□ 0.16
Rfx4Q7TNK1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rfx4Q7TNK1 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Rfx4Q7TNK1 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.03■□□□□ 0.16
Rfx4Q7TNK1 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.03■□□□□ 0.16
Rfx4Q7TNK1 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.03■□□□□ 0.16
Rfx4Q7TNK1 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms