Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubfd1Q78JW9 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubfd1Q78JW9 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Ubfd1Q78JW9 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubfd1Q78JW9 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.24■□□□□ 0.19
Ubfd1Q78JW9 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubfd1Q78JW9 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Ubfd1Q78JW9 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubfd1Q78JW9 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Ubfd1Q78JW9 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubfd1Q78JW9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubfd1Q78JW9 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.24■□□□□ 0.19
Ubfd1Q78JW9 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Ubfd1Q78JW9 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubfd1Q78JW9 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ubfd1Q78JW9 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubfd1Q78JW9 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubfd1Q78JW9 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ubfd1Q78JW9 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubfd1Q78JW9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubfd1Q78JW9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubfd1Q78JW9 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubfd1Q78JW9 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.23■□□□□ 0.19
Ubfd1Q78JW9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubfd1Q78JW9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ubfd1Q78JW9 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Ubfd1Q78JW9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ubfd1Q78JW9 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.23■□□□□ 0.19
Ubfd1Q78JW9 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubfd1Q78JW9 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubfd1Q78JW9 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ubfd1Q78JW9 Gm27741-201ENSMUST00000185060 237 ntBASIC16.23■□□□□ 0.19
Ubfd1Q78JW9 Gm17971-201ENSMUST00000190239 806 ntBASIC16.23■□□□□ 0.19
Ubfd1Q78JW9 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ubfd1Q78JW9 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubfd1Q78JW9 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Ubfd1Q78JW9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ubfd1Q78JW9 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubfd1Q78JW9 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubfd1Q78JW9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Ubfd1Q78JW9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubfd1Q78JW9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubfd1Q78JW9 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubfd1Q78JW9 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubfd1Q78JW9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubfd1Q78JW9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubfd1Q78JW9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubfd1Q78JW9 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ubfd1Q78JW9 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubfd1Q78JW9 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubfd1Q78JW9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ubfd1Q78JW9 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.22■□□□□ 0.19
Ubfd1Q78JW9 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.22■□□□□ 0.19
Ubfd1Q78JW9 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.22■□□□□ 0.19
Ubfd1Q78JW9 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Ubfd1Q78JW9 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Ubfd1Q78JW9 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ubfd1Q78JW9 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubfd1Q78JW9 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubfd1Q78JW9 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ubfd1Q78JW9 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubfd1Q78JW9 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ubfd1Q78JW9 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubfd1Q78JW9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubfd1Q78JW9 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.21■□□□□ 0.19
Ubfd1Q78JW9 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.21■□□□□ 0.19
Ubfd1Q78JW9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ubfd1Q78JW9 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ubfd1Q78JW9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ubfd1Q78JW9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ubfd1Q78JW9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ubfd1Q78JW9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ubfd1Q78JW9 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Ubfd1Q78JW9 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ubfd1Q78JW9 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Ubfd1Q78JW9 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.21■□□□□ 0.19
Ubfd1Q78JW9 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.21■□□□□ 0.19
Ubfd1Q78JW9 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ubfd1Q78JW9 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ubfd1Q78JW9 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ubfd1Q78JW9 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ubfd1Q78JW9 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ubfd1Q78JW9 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ubfd1Q78JW9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ubfd1Q78JW9 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.21■□□□□ 0.19
Ubfd1Q78JW9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ubfd1Q78JW9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Ubfd1Q78JW9 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ubfd1Q78JW9 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ubfd1Q78JW9 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ubfd1Q78JW9 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ubfd1Q78JW9 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ubfd1Q78JW9 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ubfd1Q78JW9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ubfd1Q78JW9 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ubfd1Q78JW9 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.2■□□□□ 0.18
Ubfd1Q78JW9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ubfd1Q78JW9 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.2■□□□□ 0.18
Ubfd1Q78JW9 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.2■□□□□ 0.18
Ubfd1Q78JW9 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms