Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Gm5867-201ENSMUST00000063197 592 ntBASIC17.26■□□□□ 0.35
Cspg5Q71M36 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.26■□□□□ 0.35
Cspg5Q71M36 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cspg5Q71M36 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cspg5Q71M36 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cspg5Q71M36 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cspg5Q71M36 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cspg5Q71M36 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cspg5Q71M36 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Cspg5Q71M36 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cspg5Q71M36 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cspg5Q71M36 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.25■□□□□ 0.35
Cspg5Q71M36 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.25■□□□□ 0.35
Cspg5Q71M36 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cspg5Q71M36 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cspg5Q71M36 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cspg5Q71M36 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cspg5Q71M36 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cspg5Q71M36 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cspg5Q71M36 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.25■□□□□ 0.35
Cspg5Q71M36 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cspg5Q71M36 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Cspg5Q71M36 Gm5864-201ENSMUST00000202263 970 ntBASIC17.25■□□□□ 0.35
Cspg5Q71M36 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cspg5Q71M36 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Cspg5Q71M36 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.25■□□□□ 0.35
Cspg5Q71M36 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.25■□□□□ 0.35
Cspg5Q71M36 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.25■□□□□ 0.35
Cspg5Q71M36 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Cspg5Q71M36 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cspg5Q71M36 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cspg5Q71M36 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cspg5Q71M36 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Cspg5Q71M36 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.25■□□□□ 0.35
Cspg5Q71M36 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cspg5Q71M36 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cspg5Q71M36 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cspg5Q71M36 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.24■□□□□ 0.35
Cspg5Q71M36 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cspg5Q71M36 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cspg5Q71M36 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Cspg5Q71M36 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cspg5Q71M36 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cspg5Q71M36 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cspg5Q71M36 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cspg5Q71M36 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Cspg5Q71M36 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Cspg5Q71M36 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.23■□□□□ 0.35
Cspg5Q71M36 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cspg5Q71M36 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.23■□□□□ 0.35
Cspg5Q71M36 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cspg5Q71M36 Gm27357-201ENSMUST00000183754 135 ntBASIC17.23■□□□□ 0.35
Cspg5Q71M36 Gm28659-201ENSMUST00000188013 759 ntBASIC17.23■□□□□ 0.35
Cspg5Q71M36 Gm18115-201ENSMUST00000221209 621 ntBASIC17.23■□□□□ 0.35
Cspg5Q71M36 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cspg5Q71M36 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cspg5Q71M36 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cspg5Q71M36 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.23■□□□□ 0.35
Cspg5Q71M36 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.23■□□□□ 0.35
Cspg5Q71M36 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cspg5Q71M36 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cspg5Q71M36 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cspg5Q71M36 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cspg5Q71M36 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Cspg5Q71M36 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Cspg5Q71M36 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Cspg5Q71M36 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cspg5Q71M36 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.22■□□□□ 0.35
Cspg5Q71M36 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Cspg5Q71M36 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Cspg5Q71M36 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Cspg5Q71M36 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Cspg5Q71M36 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cspg5Q71M36 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cspg5Q71M36 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cspg5Q71M36 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cspg5Q71M36 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cspg5Q71M36 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cspg5Q71M36 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cspg5Q71M36 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cspg5Q71M36 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cspg5Q71M36 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Cspg5Q71M36 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Cspg5Q71M36 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.21■□□□□ 0.35
Cspg5Q71M36 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cspg5Q71M36 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cspg5Q71M36 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Cspg5Q71M36 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cspg5Q71M36 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Cspg5Q71M36 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cspg5Q71M36 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cspg5Q71M36 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cspg5Q71M36 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cspg5Q71M36 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cspg5Q71M36 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cspg5Q71M36 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Cspg5Q71M36 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Cspg5Q71M36 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cspg5Q71M36 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cspg5Q71M36 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms