Protein–RNA interactions for Protein: Q6PFY8

Trim45, Tripartite motif-containing protein 45, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim45Q6PFY8 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trim45Q6PFY8 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trim45Q6PFY8 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trim45Q6PFY8 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trim45Q6PFY8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
Trim45Q6PFY8 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim45Q6PFY8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim45Q6PFY8 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim45Q6PFY8 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.84■□□□□ 0.13
Trim45Q6PFY8 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim45Q6PFY8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim45Q6PFY8 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim45Q6PFY8 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim45Q6PFY8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trim45Q6PFY8 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim45Q6PFY8 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim45Q6PFY8 Dancr-204ENSMUST00000132389 2347 ntBASIC15.83■□□□□ 0.12
Trim45Q6PFY8 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.83■□□□□ 0.12
Trim45Q6PFY8 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim45Q6PFY8 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim45Q6PFY8 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim45Q6PFY8 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim45Q6PFY8 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.83■□□□□ 0.12
Trim45Q6PFY8 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.83■□□□□ 0.12
Trim45Q6PFY8 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim45Q6PFY8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim45Q6PFY8 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trim45Q6PFY8 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim45Q6PFY8 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
Trim45Q6PFY8 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim45Q6PFY8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Trim45Q6PFY8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim45Q6PFY8 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim45Q6PFY8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim45Q6PFY8 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim45Q6PFY8 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trim45Q6PFY8 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim45Q6PFY8 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim45Q6PFY8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim45Q6PFY8 Idnk-204ENSMUST00000226010 1898 ntBASIC15.82■□□□□ 0.12
Trim45Q6PFY8 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trim45Q6PFY8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.82■□□□□ 0.12
Trim45Q6PFY8 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trim45Q6PFY8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.82■□□□□ 0.12
Trim45Q6PFY8 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim45Q6PFY8 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.82■□□□□ 0.12
Trim45Q6PFY8 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.82■□□□□ 0.12
Trim45Q6PFY8 Gm37025-201ENSMUST00000195159 829 ntBASIC15.82■□□□□ 0.12
Trim45Q6PFY8 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim45Q6PFY8 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim45Q6PFY8 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim45Q6PFY8 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim45Q6PFY8 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim45Q6PFY8 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim45Q6PFY8 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim45Q6PFY8 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Trim45Q6PFY8 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim45Q6PFY8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim45Q6PFY8 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.82■□□□□ 0.12
Trim45Q6PFY8 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trim45Q6PFY8 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim45Q6PFY8 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim45Q6PFY8 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim45Q6PFY8 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim45Q6PFY8 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim45Q6PFY8 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.81■□□□□ 0.12
Trim45Q6PFY8 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim45Q6PFY8 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim45Q6PFY8 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Trim45Q6PFY8 Gm6659-201ENSMUST00000174752 547 ntBASIC15.81■□□□□ 0.12
Trim45Q6PFY8 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim45Q6PFY8 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim45Q6PFY8 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim45Q6PFY8 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.81■□□□□ 0.12
Trim45Q6PFY8 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trim45Q6PFY8 Gm7791-201ENSMUST00000219066 539 ntBASIC15.81■□□□□ 0.12
Trim45Q6PFY8 Gm18032-201ENSMUST00000222541 538 ntBASIC15.81■□□□□ 0.12
Trim45Q6PFY8 Il3ra-202ENSMUST00000223589 738 ntBASIC15.81■□□□□ 0.12
Trim45Q6PFY8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim45Q6PFY8 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.81■□□□□ 0.12
Trim45Q6PFY8 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim45Q6PFY8 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim45Q6PFY8 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim45Q6PFY8 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim45Q6PFY8 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.8■□□□□ 0.12
Trim45Q6PFY8 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.8■□□□□ 0.12
Trim45Q6PFY8 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim45Q6PFY8 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim45Q6PFY8 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.8■□□□□ 0.12
Trim45Q6PFY8 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.8■□□□□ 0.12
Trim45Q6PFY8 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trim45Q6PFY8 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim45Q6PFY8 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim45Q6PFY8 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim45Q6PFY8 Mir8112-201ENSMUST00000184382 131 ntBASIC15.8■□□□□ 0.12
Trim45Q6PFY8 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.8■□□□□ 0.12
Trim45Q6PFY8 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim45Q6PFY8 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim45Q6PFY8 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim45Q6PFY8 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms