Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm25990-201ENSMUST00000102440 86 ntBASIC19.6■□□□□ 0.73
Nup98Q6PFD9 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nup98Q6PFD9 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nup98Q6PFD9 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nup98Q6PFD9 Gm7230-201ENSMUST00000173026 815 ntBASIC19.6■□□□□ 0.73
Nup98Q6PFD9 Mir5131-201ENSMUST00000175426 93 ntBASIC19.6■□□□□ 0.73
Nup98Q6PFD9 Gm6443-201ENSMUST00000203599 874 ntBASIC19.6■□□□□ 0.73
Nup98Q6PFD9 Rbfox2-207ENSMUST00000227533 1041 ntBASIC19.6■□□□□ 0.73
Nup98Q6PFD9 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nup98Q6PFD9 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nup98Q6PFD9 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nup98Q6PFD9 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Nup98Q6PFD9 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.59■□□□□ 0.73
Nup98Q6PFD9 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nup98Q6PFD9 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nup98Q6PFD9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nup98Q6PFD9 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC19.59■□□□□ 0.73
Nup98Q6PFD9 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nup98Q6PFD9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nup98Q6PFD9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nup98Q6PFD9 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nup98Q6PFD9 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Nup98Q6PFD9 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nup98Q6PFD9 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nup98Q6PFD9 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nup98Q6PFD9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nup98Q6PFD9 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Nup98Q6PFD9 Gm13036-201ENSMUST00000117799 748 ntBASIC19.58■□□□□ 0.73
Nup98Q6PFD9 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC19.58■□□□□ 0.73
Nup98Q6PFD9 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.58■□□□□ 0.73
Nup98Q6PFD9 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Nup98Q6PFD9 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Nup98Q6PFD9 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
Nup98Q6PFD9 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nup98Q6PFD9 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nup98Q6PFD9 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nup98Q6PFD9 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nup98Q6PFD9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nup98Q6PFD9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Nup98Q6PFD9 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nup98Q6PFD9 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nup98Q6PFD9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Nup98Q6PFD9 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC19.58■□□□□ 0.72
Nup98Q6PFD9 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Nup98Q6PFD9 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.57■□□□□ 0.72
Nup98Q6PFD9 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nup98Q6PFD9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nup98Q6PFD9 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nup98Q6PFD9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nup98Q6PFD9 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC19.57■□□□□ 0.72
Nup98Q6PFD9 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nup98Q6PFD9 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nup98Q6PFD9 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Nup98Q6PFD9 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
Nup98Q6PFD9 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nup98Q6PFD9 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nup98Q6PFD9 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.57■□□□□ 0.72
Nup98Q6PFD9 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nup98Q6PFD9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Nup98Q6PFD9 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nup98Q6PFD9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nup98Q6PFD9 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Nup98Q6PFD9 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC19.56■□□□□ 0.72
Nup98Q6PFD9 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC19.56■□□□□ 0.72
Nup98Q6PFD9 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
Nup98Q6PFD9 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nup98Q6PFD9 AC127349.1-201ENSMUST00000224590 266 ntBASIC19.56■□□□□ 0.72
Nup98Q6PFD9 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nup98Q6PFD9 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nup98Q6PFD9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nup98Q6PFD9 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Nup98Q6PFD9 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nup98Q6PFD9 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nup98Q6PFD9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nup98Q6PFD9 Gm12350-201ENSMUST00000121208 462 ntBASIC19.55■□□□□ 0.72
Nup98Q6PFD9 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC19.55■□□□□ 0.72
Nup98Q6PFD9 Gm18195-201ENSMUST00000207604 706 ntBASIC19.55■□□□□ 0.72
Nup98Q6PFD9 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC19.55■□□□□ 0.72
Nup98Q6PFD9 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC19.55■□□□□ 0.72
Nup98Q6PFD9 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
Nup98Q6PFD9 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nup98Q6PFD9 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.55■□□□□ 0.72
Nup98Q6PFD9 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC19.55■□□□□ 0.72
Nup98Q6PFD9 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nup98Q6PFD9 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nup98Q6PFD9 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nup98Q6PFD9 AC132265.1-201ENSMUST00000219233 1665 ntBASIC19.55■□□□□ 0.72
Nup98Q6PFD9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nup98Q6PFD9 Mir6404-201ENSMUST00000183699 94 ntBASIC19.55■□□□□ 0.72
Nup98Q6PFD9 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC19.55■□□□□ 0.72
Nup98Q6PFD9 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nup98Q6PFD9 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nup98Q6PFD9 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Nup98Q6PFD9 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nup98Q6PFD9 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nup98Q6PFD9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nup98Q6PFD9 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC19.54■□□□□ 0.72
Nup98Q6PFD9 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Nup98Q6PFD9 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Nup98Q6PFD9 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms